--------------------------------------------------------------------- Building ecCodes package on 20-Apr-2022 11:13 UT host localhost.localdomain by mohapatra --------------------------------------------------------------------- >> Compiler: gfortran Install target: /home/mohapatra/ROPP_dir/gfortran Logging to: /home/mohapatra/ROPP_dir/gfortran/buildeccodes_ropp.log >> Checking ECCODES / package ... - Found installed source package eccodes-2.23.0-Source (ECCODES / version 2.23.0) ------------------------------------------------------------------ >> Building ecCodes (v2.23.0) with 'gfortran' compiler on LINUX ------------------------------------------------------------------ - using configure script configure/eccodes_configure_gfortran_linux rm: cannot remove 'CMakeCache.txt': No such file or directory rm: cannot remove 'CMakeFiles/': No such file or directory ------------------------------------------------------------------ >> Building, testing & installing... Platform: Linux localhost.localdomain 5.3.11-100.fc29.x86_64 #1 SMP Tue Nov 12 20:41:25 UTC 2019 x86_64 x86_64 x86_64 GNU/Linux Fortran compiler: GNU Fortran (GCC) 8.3.1 20190223 (Red Hat 8.3.1-2) Copyright (C) 2018 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. C compiler: gcc (GCC) 8.3.1 20190223 (Red Hat 8.3.1-2) Copyright (C) 2018 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. Installation target: /home/mohapatra/ROPP_dir/gfortran -- ecbuild 3.6.3 /home/mohapatra/ROPP_dir/eccodes-2.23.0-Source/cmake -- cmake 3.14.5 /usr/bin/cmake -- --------------------------------------------------------- -- Added C flag [-pipe] -- --------------------------------------------------------- -- --------------------------------------------------------- -- [eccodes] (2.23.0) -- Feature TESTS enabled -- Operating system=Linux-5.3.11-100.fc29.x86_64 (64 bits) -- Feature PRODUCT_GRIB enabled -- Feature PRODUCT_BUFR enabled -- Feature EXAMPLES enabled -- Feature BUILD_TOOLS enabled -- Feature JPG enabled -- Feature JPG_LIBJASPER enabled -- Feature JPG_LIBOPENJPEG enabled -- FindNetCDF defines targets: -- - NetCDF::NetCDF_C [/home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a] -- eccodes FOUND NetCDF (found version "4.8.1") -- Found package NetCDF required for feature NETCDF -- Feature NETCDF enabled -- Could NOT find AEC (missing: AEC_LIBRARY AEC_INCLUDE_DIR) -- Feature FORTRAN enabled -- Feature INSTALL_ECCODES_DEFINITIONS enabled -- Feature INSTALL_ECCODES_SAMPLES enabled -- Could NOT find OpenJPEG (missing: OPENJPEG_LIBRARY OPENJPEG_INCLUDE_DIR) -- HAVE_JPEG=1 -- HAVE_LIBJASPER=1 -- HAVE_LIBOPENJPEG=0 -- CMAKE_THREAD_LIBS_INIT=-lpthread -- CMAKE_USE_PTHREADS_INIT=1 -- HAVE_ECCODES_THREADS=0 -- GRIB_PTHREADS=0 -- GRIB_OMP_THREADS=0 -- Added C flag [-pedantic] -- pkg-config file to be created during build: eccodes.pc -- pkg-config file to be created during build: eccodes_f90.pc -- --------------------------------------------------------- -- Project eccodes summary -- --------------------------------------------------------- -- CMath -- libs : [/usr/lib64/libm.so] -- Jasper 2.0.14 -- libs : [/usr/lib64/libjasper.so;/usr/lib64/libjpeg.so] -- --------------------------------------------------------- -- Build summary -- --------------------------------------------------------- -- system : [localhost.localdomain] [Linux-5.3.11-100.fc29.x86_64] [linux.64] -- processor : [x86_64] -- endiness : Little Endian -- IEEE [1] -- build type : [RelWithDebInfo] -- timestamp : [20220420162522] -- install prefix : [/home/mohapatra/ROPP_dir/gfortran] -- bin dir : [/home/mohapatra/ROPP_dir/gfortran/bin] -- lib dir : [/home/mohapatra/ROPP_dir/gfortran/lib64] -- include dir : [/home/mohapatra/ROPP_dir/gfortran/include] -- data dir : [/home/mohapatra/ROPP_dir/gfortran/share/eccodes] -- cmake dir : [/home/mohapatra/ROPP_dir/gfortran/lib64/cmake/eccodes] -- --------------------------------------------------------- -- C -- GNU 8.3.1 -- compiler : /usr/bin/cc -- flags : -pipe -pedantic -O2 -g -DNDEBUG -- link flags : -- Fortran -- GNU 8.3.1 -- compiler : /usr/bin/gfortran -- flags : -O2 -g -DNDEBUG -- link flags : -- linker : /usr/bin/ld -- ar : /usr/bin/ar -- ranlib : /usr/bin/ranlib -- link flags -- executable [ -Wl,--disable-new-dtags ] -- shared lib [ -Wl,--disable-new-dtags ] -- static lib [ -Wl,--disable-new-dtags ] -- install rpath : $ORIGIN/../lib64 -- common definitions: HAVE_ECCODES_CONFIG_H -- --------------------------------------------------------- -- Feature summary -- --------------------------------------------------------- -- The following features have been enabled: * TESTS, eccodes: Enable the unit tests * PRODUCT_GRIB, eccodes: Support for the product GRIB * PRODUCT_BUFR, eccodes: Support for the product BUFR * EXAMPLES, eccodes: Build the examples * BUILD_TOOLS, eccodes: Build the command line tools * JPG, eccodes: Support for JPG decoding/encoding * JPG_LIBJASPER, eccodes: Support for JPG decoding/encoding with the Jasper library * JPG_LIBOPENJPEG, eccodes: Support for JPG decoding/encoding with the OpenJPEG library * NETCDF, eccodes: Support for GRIB to NetCDF conversion * FORTRAN, eccodes: Build the ecCodes Fortran interface * INSTALL_ECCODES_DEFINITIONS, eccodes: Install the ecCodes definitions * INSTALL_ECCODES_SAMPLES, eccodes: Install the ecCodes samples, including IFS samples -- The following OPTIONAL packages have been found: * Git * NetCDF * PythonInterp, Python interpreter, * NumPy * CMath * JPEG * Jasper * Perl -- The following REQUIRED packages have been found: * ecbuild (required version >= 3.4) * Threads -- The following features have been disabled: * PNG, eccodes: Support for PNG decoding/encoding * AEC, eccodes: Support for Adaptive Entropy Coding * PYTHON2, eccodes: Build the ecCodes Python2 interface (deprecated) * MEMFS, eccodes: Memory based access to definitions/samples * MEMORY_MANAGEMENT, eccodes: Enable memory management * ALIGN_MEMORY, eccodes: Enable memory alignment * TIMER, eccodes: Enable timer * ECCODES_THREADS, eccodes: Enable POSIX threads * ECCODES_OMP_THREADS, eccodes: Enable OMP threads * EXTRA_TESTS, eccodes: Enable extended regression testing -- The following OPTIONAL packages have not been found: * AEC, eccodes: Support for Adaptive Entropy Coding * OpenJPEG -- -- +--------------------------+ -- | ecCodes version 2.23.0 | -- +--------------------------+ -- -- +--------------------------------------+ -- | Please note: | -- | For Python3 support, first install | -- | ecCodes and then install the Python | -- | bindings from PyPI with: | -- | $ pip3 install eccodes | -- +--------------------------------------+ -- -- Configuring done -- Generating done -- Build files have been written to: /home/mohapatra/ROPP_dir/eccodes-2.23.0-Source/tmpbuild [ 0%] Built target eccodes.pc-pkg-config [ 0%] Built target eccodes_f90.pc-pkg-config [ 60%] Built target eccodes [ 60%] Built target grib_tools [ 61%] Built target codes_bufr_filter [ 61%] Linking C executable ../bin/grib_to_netcdf /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-hdf5file.o): in function `dumpopenobjects': hdf5file.c:(.text+0x24): undefined reference to `H5Fget_obj_count' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-hdf5file.o): in function `sync_netcdf4_file': hdf5file.c:(.text+0x259): undefined reference to `H5Fflush' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-hdf5file.o): in function `nc4_close_netcdf4_file': hdf5file.c:(.text+0x391): undefined reference to `H5Fclose' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-hdf5grp.o): in function `NC4_rename_grp': hdf5grp.c:(.text+0x211): undefined reference to `H5Gclose' /usr/bin/ld: hdf5grp.c:(.text+0x303): undefined reference to `H5Lmove' /usr/bin/ld: hdf5grp.c:(.text+0x315): undefined reference to `H5Gopen2' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-hdf5internal.o): in function `nc4_hdf5_initialize': hdf5internal.c:(.text+0xb): undefined reference to `H5Eset_auto2' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-hdf5internal.o): in function `nc4_rec_find_hdf_type': hdf5internal.c:(.text+0x9e): undefined reference to `H5Tequal' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-hdf5internal.o): in function `nc4_find_dim_len': hdf5internal.c:(.text+0x226): undefined reference to `H5Dget_space' /usr/bin/ld: hdf5internal.c:(.text+0x238): undefined reference to `H5Sget_simple_extent_type' /usr/bin/ld: hdf5internal.c:(.text+0x26a): undefined reference to `H5Sclose' /usr/bin/ld: hdf5internal.c:(.text+0x2c1): undefined reference to `H5Sget_simple_extent_ndims' /usr/bin/ld: hdf5internal.c:(.text+0x34e): undefined reference to `H5Sget_simple_extent_dims' /usr/bin/ld: hdf5internal.c:(.text+0x3b6): undefined reference to `H5Sclose' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-hdf5internal.o): in function `delete_dimscale_dataset': hdf5internal.c:(.text+0x5c3): undefined reference to `H5Dclose' /usr/bin/ld: hdf5internal.c:(.text+0x5db): undefined reference to `H5Gunlink' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-hdf5internal.o): in function `nc4_reform_coord_var': hdf5internal.c:(.text+0x88c): undefined reference to `H5DSdetach_scale' /usr/bin/ld: hdf5internal.c:(.text+0x912): undefined reference to `H5Dclose' /usr/bin/ld: hdf5internal.c:(.text+0x93c): undefined reference to `H5Gunlink' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-hdf5internal.o): in function `nc4_rec_grp_HDF5_del': hdf5internal.c:(.text+0xa62): undefined reference to `H5Tclose' /usr/bin/ld: hdf5internal.c:(.text+0xb4d): undefined reference to `H5Tclose' /usr/bin/ld: hdf5internal.c:(.text+0xbf2): undefined reference to `H5Dclose' /usr/bin/ld: hdf5internal.c:(.text+0xca1): undefined reference to `H5Tclose' /usr/bin/ld: hdf5internal.c:(.text+0xcb1): undefined reference to `H5Tclose' /usr/bin/ld: hdf5internal.c:(.text+0xcc1): undefined reference to `H5Dclose' /usr/bin/ld: hdf5internal.c:(.text+0xd19): undefined reference to `H5Gclose' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-hdf5open.o): in function `rec_read_metadata': hdf5open.c:(.text+0x61): undefined reference to `H5Gopen2' /usr/bin/ld: hdf5open.c:(.text+0x7f): undefined reference to `H5Gget_create_plist' /usr/bin/ld: hdf5open.c:(.text+0x98): undefined reference to `H5Pget_link_creation_order' /usr/bin/ld: hdf5open.c:(.text+0xec): undefined reference to `H5Literate' /usr/bin/ld: hdf5open.c:(.text+0x1cf): undefined reference to `H5Pclose' /usr/bin/ld: hdf5open.c:(.text+0x219): undefined reference to `H5Oclose' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-hdf5open.o): in function `dimscale_visitor': hdf5open.c:(.text+0x2d9): undefined reference to `H5Gget_objinfo' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-hdf5open.o): in function `read_coord_dimids': hdf5open.c:(.text+0x37d): undefined reference to `H5Aexists' /usr/bin/ld: hdf5open.c:(.text+0x39e): undefined reference to `H5Aopen_name' /usr/bin/ld: hdf5open.c:(.text+0x3ae): undefined reference to `H5Aget_type' /usr/bin/ld: hdf5open.c:(.text+0x3be): undefined reference to `H5Aget_space' /usr/bin/ld: hdf5open.c:(.text+0x3ce): undefined reference to `H5Sget_simple_extent_npoints' /usr/bin/ld: hdf5open.c:(.text+0x3e6): undefined reference to `H5Sclose' /usr/bin/ld: hdf5open.c:(.text+0x3f8): undefined reference to `H5Tclose' /usr/bin/ld: hdf5open.c:(.text+0x40a): undefined reference to `H5Aclose' /usr/bin/ld: hdf5open.c:(.text+0x42b): undefined reference to `H5Aread' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-hdf5open.o): in function `get_netcdf_type': hdf5open.c:(.text+0x4c9): undefined reference to `H5Tget_class' /usr/bin/ld: hdf5open.c:(.text+0x511): undefined reference to `H5open' /usr/bin/ld: hdf5open.c:(.text+0x518): undefined reference to `H5T_NATIVE_SCHAR_g' /usr/bin/ld: hdf5open.c:(.text+0x520): undefined reference to `H5Tequal' /usr/bin/ld: hdf5open.c:(.text+0x554): undefined reference to `H5Tis_variable_str' /usr/bin/ld: hdf5open.c:(.text+0x571): undefined reference to `H5open' /usr/bin/ld: hdf5open.c:(.text+0x578): undefined reference to `H5T_NATIVE_SHORT_g' /usr/bin/ld: hdf5open.c:(.text+0x580): undefined reference to `H5Tequal' /usr/bin/ld: hdf5open.c:(.text+0x5b1): undefined reference to `H5open' /usr/bin/ld: hdf5open.c:(.text+0x5b8): undefined reference to `H5T_NATIVE_INT_g' /usr/bin/ld: hdf5open.c:(.text+0x5c0): undefined reference to `H5Tequal' /usr/bin/ld: hdf5open.c:(.text+0x5e1): undefined reference to `H5open' /usr/bin/ld: hdf5open.c:(.text+0x5e8): undefined reference to `H5T_NATIVE_FLOAT_g' /usr/bin/ld: hdf5open.c:(.text+0x5f0): undefined reference to `H5Tequal' /usr/bin/ld: hdf5open.c:(.text+0x621): undefined reference to `H5open' /usr/bin/ld: hdf5open.c:(.text+0x628): undefined reference to `H5T_NATIVE_DOUBLE_g' /usr/bin/ld: hdf5open.c:(.text+0x630): undefined reference to `H5Tequal' /usr/bin/ld: hdf5open.c:(.text+0x64c): undefined reference to `H5open' /usr/bin/ld: hdf5open.c:(.text+0x653): undefined reference to `H5T_NATIVE_UCHAR_g' /usr/bin/ld: hdf5open.c:(.text+0x65b): undefined reference to `H5Tequal' /usr/bin/ld: hdf5open.c:(.text+0x685): undefined reference to `H5open' /usr/bin/ld: hdf5open.c:(.text+0x68c): undefined reference to `H5T_NATIVE_USHORT_g' /usr/bin/ld: hdf5open.c:(.text+0x694): undefined reference to `H5Tequal' /usr/bin/ld: hdf5open.c:(.text+0x6b4): undefined reference to `H5open' /usr/bin/ld: hdf5open.c:(.text+0x6bb): undefined reference to `H5T_NATIVE_UINT_g' /usr/bin/ld: hdf5open.c:(.text+0x6c3): undefined reference to `H5Tequal' /usr/bin/ld: hdf5open.c:(.text+0x6df): undefined reference to `H5open' /usr/bin/ld: hdf5open.c:(.text+0x6e6): undefined reference to `H5T_NATIVE_LLONG_g' /usr/bin/ld: hdf5open.c:(.text+0x6ee): undefined reference to `H5Tequal' /usr/bin/ld: hdf5open.c:(.text+0x70e): undefined reference to `H5open' /usr/bin/ld: hdf5open.c:(.text+0x715): undefined reference to `H5T_NATIVE_ULLONG_g' /usr/bin/ld: hdf5open.c:(.text+0x71d): undefined reference to `H5Tequal' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-hdf5open.o): in function `read_type': hdf5open.c:(.text+0x789): undefined reference to `H5Tget_native_type' /usr/bin/ld: hdf5open.c:(.text+0x79d): undefined reference to `H5Tget_size' /usr/bin/ld: hdf5open.c:(.text+0x813): undefined reference to `H5Iinc_ref' /usr/bin/ld: hdf5open.c:(.text+0x81f): undefined reference to `H5Tget_class' /usr/bin/ld: hdf5open.c:(.text+0x844): undefined reference to `H5Tis_variable_str' /usr/bin/ld: hdf5open.c:(.text+0x883): undefined reference to `H5Tget_super' /usr/bin/ld: hdf5open.c:(.text+0x8b0): undefined reference to `H5Tget_nmembers' /usr/bin/ld: hdf5open.c:(.text+0x937): undefined reference to `H5free_memory' /usr/bin/ld: hdf5open.c:(.text+0x94d): undefined reference to `H5Tget_member_type' /usr/bin/ld: hdf5open.c:(.text+0x963): undefined reference to `H5Tget_native_type' /usr/bin/ld: hdf5open.c:(.text+0x97c): undefined reference to `H5Tget_member_name' /usr/bin/ld: hdf5open.c:(.text+0x9a7): undefined reference to `H5Tget_member_offset' /usr/bin/ld: hdf5open.c:(.text+0x9b4): undefined reference to `H5Tget_class' /usr/bin/ld: hdf5open.c:(.text+0x9cd): undefined reference to `H5Tget_array_ndims' /usr/bin/ld: hdf5open.c:(.text+0x9eb): undefined reference to `H5Tget_array_dims1' /usr/bin/ld: hdf5open.c:(.text+0xa31): undefined reference to `H5Tget_super' /usr/bin/ld: hdf5open.c:(.text+0xaa4): undefined reference to `H5Tget_size' /usr/bin/ld: hdf5open.c:(.text+0xae6): undefined reference to `H5Tget_nmembers' /usr/bin/ld: hdf5open.c:(.text+0xb5d): undefined reference to `H5Tget_member_value' /usr/bin/ld: hdf5open.c:(.text+0xb8c): undefined reference to `H5free_memory' /usr/bin/ld: hdf5open.c:(.text+0xb9f): undefined reference to `H5Tget_member_name' /usr/bin/ld: hdf5open.c:(.text+0xbc6): undefined reference to `H5Tget_super' /usr/bin/ld: hdf5open.c:(.text+0xbda): undefined reference to `H5Tget_size' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-hdf5open.o): in function `create_phony_dims': hdf5open.c:(.text+0xc8f): undefined reference to `H5Dget_space' /usr/bin/ld: hdf5open.c:(.text+0xcb4): undefined reference to `H5Sget_simple_extent_type' /usr/bin/ld: hdf5open.c:(.text+0xe10): undefined reference to `H5Sget_simple_extent_dims' /usr/bin/ld: hdf5open.c:(.text+0xf06): undefined reference to `H5Sclose' /usr/bin/ld: hdf5open.c:(.text+0xfa4): undefined reference to `H5Sclose' /usr/bin/ld: hdf5open.c:(.text+0xfc9): undefined reference to `H5Sclose' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-hdf5open.o): in function `get_chunking_info': hdf5open.c:(.text+0x1357): undefined reference to `H5Pget_layout' /usr/bin/ld: hdf5open.c:(.text+0x139c): undefined reference to `H5Pget_chunk' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-hdf5open.o): in function `get_attached_info.isra.1': hdf5open.c:(.text+0x141d): undefined reference to `H5DSget_num_scales' /usr/bin/ld: hdf5open.c:(.text+0x14b8): undefined reference to `H5DSiterate_scales' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-hdf5open.o): in function `read_hdf5_obj': hdf5open.c:(.text+0x150a): undefined reference to `H5Oopen' /usr/bin/ld: hdf5open.c:(.text+0x153c): undefined reference to `H5Gget_objinfo' /usr/bin/ld: hdf5open.c:(.text+0x1588): undefined reference to `H5Oclose' /usr/bin/ld: hdf5open.c:(.text+0x15c0): undefined reference to `H5Dget_space' /usr/bin/ld: hdf5open.c:(.text+0x15d4): undefined reference to `H5Sget_simple_extent_ndims' /usr/bin/ld: hdf5open.c:(.text+0x15e7): undefined reference to `H5DSis_scale' /usr/bin/ld: hdf5open.c:(.text+0x16da): undefined reference to `H5Iinc_ref' /usr/bin/ld: hdf5open.c:(.text+0x1731): undefined reference to `H5Idec_ref' /usr/bin/ld: hdf5open.c:(.text+0x1780): undefined reference to `H5Oclose' /usr/bin/ld: hdf5open.c:(.text+0x1811): undefined reference to `H5Sget_simple_extent_dims' /usr/bin/ld: hdf5open.c:(.text+0x186c): undefined reference to `H5Aexists' /usr/bin/ld: hdf5open.c:(.text+0x1887): undefined reference to `H5Aopen_name' /usr/bin/ld: hdf5open.c:(.text+0x189a): undefined reference to `H5open' /usr/bin/ld: hdf5open.c:(.text+0x18ab): undefined reference to `H5T_NATIVE_INT_g' /usr/bin/ld: hdf5open.c:(.text+0x18b3): undefined reference to `H5Aread' /usr/bin/ld: hdf5open.c:(.text+0x1910): undefined reference to `H5Aclose' /usr/bin/ld: hdf5open.c:(.text+0x192d): undefined reference to `H5Sclose' /usr/bin/ld: hdf5open.c:(.text+0x19fe): undefined reference to `H5Sclose' /usr/bin/ld: hdf5open.c:(.text+0x1ad7): undefined reference to `H5Dget_type' /usr/bin/ld: hdf5open.c:(.text+0x1aef): undefined reference to `H5Tget_native_type' /usr/bin/ld: hdf5open.c:(.text+0x1b05): undefined reference to `H5Tget_class' /usr/bin/ld: hdf5open.c:(.text+0x1b5b): undefined reference to `H5Tclose' /usr/bin/ld: hdf5open.c:(.text+0x1b6d): undefined reference to `H5Tclose' /usr/bin/ld: hdf5open.c:(.text+0x1bb2): undefined reference to `H5Oclose' /usr/bin/ld: hdf5open.c:(.text+0x1bd1): undefined reference to `H5Sclose' /usr/bin/ld: hdf5open.c:(.text+0x1c8d): undefined reference to `H5DSget_scale_name' /usr/bin/ld: hdf5open.c:(.text+0x1d10): undefined reference to `H5Iinc_ref' /usr/bin/ld: hdf5open.c:(.text+0x1d2c): undefined reference to `H5Aclose' /usr/bin/ld: hdf5open.c:(.text+0x1d61): undefined reference to `H5Aclose' /usr/bin/ld: hdf5open.c:(.text+0x1e22): undefined reference to `H5Tequal' /usr/bin/ld: hdf5open.c:(.text+0x1e48): undefined reference to `H5Tget_order' /usr/bin/ld: hdf5open.c:(.text+0x1f69): undefined reference to `H5open' /usr/bin/ld: hdf5open.c:(.text+0x1f70): undefined reference to `H5T_NATIVE_SCHAR_g' /usr/bin/ld: hdf5open.c:(.text+0x1f7c): undefined reference to `H5open' /usr/bin/ld: hdf5open.c:(.text+0x1f83): undefined reference to `H5T_NATIVE_SHORT_g' /usr/bin/ld: hdf5open.c:(.text+0x1f8f): undefined reference to `H5open' /usr/bin/ld: hdf5open.c:(.text+0x1f96): undefined reference to `H5T_NATIVE_INT_g' /usr/bin/ld: hdf5open.c:(.text+0x1fa2): undefined reference to `H5open' /usr/bin/ld: hdf5open.c:(.text+0x1fa9): undefined reference to `H5T_NATIVE_FLOAT_g' /usr/bin/ld: hdf5open.c:(.text+0x1fb5): undefined reference to `H5open' /usr/bin/ld: hdf5open.c:(.text+0x1fbc): undefined reference to `H5T_NATIVE_DOUBLE_g' /usr/bin/ld: hdf5open.c:(.text+0x1fc8): undefined reference to `H5open' /usr/bin/ld: hdf5open.c:(.text+0x1fcf): undefined reference to `H5T_NATIVE_UCHAR_g' /usr/bin/ld: hdf5open.c:(.text+0x1fdb): undefined reference to `H5open' /usr/bin/ld: hdf5open.c:(.text+0x1fe2): undefined reference to `H5T_NATIVE_USHORT_g' /usr/bin/ld: hdf5open.c:(.text+0x1fee): undefined reference to `H5open' /usr/bin/ld: hdf5open.c:(.text+0x1ff5): undefined reference to `H5T_NATIVE_UINT_g' /usr/bin/ld: hdf5open.c:(.text+0x2001): undefined reference to `H5open' /usr/bin/ld: hdf5open.c:(.text+0x2008): undefined reference to `H5T_NATIVE_LLONG_g' /usr/bin/ld: hdf5open.c:(.text+0x2014): undefined reference to `H5open' /usr/bin/ld: hdf5open.c:(.text+0x201b): undefined reference to `H5T_NATIVE_ULLONG_g' /usr/bin/ld: hdf5open.c:(.text+0x204a): undefined reference to `H5Tis_variable_str' /usr/bin/ld: hdf5open.c:(.text+0x2080): undefined reference to `H5Tget_size' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-hdf5open.o): in function `att_read_callbk': hdf5open.c:(.text+0x2260): undefined reference to `H5Aopen' /usr/bin/ld: hdf5open.c:(.text+0x22ab): undefined reference to `H5Aget_type' /usr/bin/ld: hdf5open.c:(.text+0x22c5): undefined reference to `H5Tget_native_type' /usr/bin/ld: hdf5open.c:(.text+0x22d9): undefined reference to `H5Tget_class' /usr/bin/ld: hdf5open.c:(.text+0x2321): undefined reference to `H5Aget_space' /usr/bin/ld: hdf5open.c:(.text+0x2337): undefined reference to `H5Sget_simple_extent_ndims' /usr/bin/ld: hdf5open.c:(.text+0x234d): undefined reference to `H5Sget_simple_extent_npoints' /usr/bin/ld: hdf5open.c:(.text+0x2386): undefined reference to `H5Tclose' /usr/bin/ld: hdf5open.c:(.text+0x2398): undefined reference to `H5Sclose' /usr/bin/ld: hdf5open.c:(.text+0x23ba): undefined reference to `H5Aclose' /usr/bin/ld: hdf5open.c:(.text+0x2416): undefined reference to `H5Tclose' /usr/bin/ld: hdf5open.c:(.text+0x2428): undefined reference to `H5Tclose' /usr/bin/ld: hdf5open.c:(.text+0x245e): undefined reference to `H5Tclose' /usr/bin/ld: hdf5open.c:(.text+0x2477): undefined reference to `H5Tget_size' /usr/bin/ld: hdf5open.c:(.text+0x2495): undefined reference to `H5Tclose' /usr/bin/ld: hdf5open.c:(.text+0x24b3): undefined reference to `H5Sclose' /usr/bin/ld: hdf5open.c:(.text+0x24c0): undefined reference to `H5Tis_variable_str' /usr/bin/ld: hdf5open.c:(.text+0x24d4): undefined reference to `H5Tget_size' /usr/bin/ld: hdf5open.c:(.text+0x2518): undefined reference to `H5Sget_simple_extent_type' /usr/bin/ld: hdf5open.c:(.text+0x25a4): undefined reference to `H5Aread' /usr/bin/ld: hdf5open.c:(.text+0x25cf): undefined reference to `H5Sclose' /usr/bin/ld: hdf5open.c:(.text+0x2665): undefined reference to `H5Aread' /usr/bin/ld: hdf5open.c:(.text+0x2705): undefined reference to `H5Sget_simple_extent_dims' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-hdf5open.o): in function `NC4_open': hdf5open.c:(.text+0x27c8): undefined reference to `H5check_version' /usr/bin/ld: hdf5open.c:(.text+0x27cd): undefined reference to `H5open' /usr/bin/ld: hdf5open.c:(.text+0x289d): undefined reference to `H5open' /usr/bin/ld: hdf5open.c:(.text+0x28a4): undefined reference to `H5P_CLS_FILE_ACCESS_ID_g' /usr/bin/ld: hdf5open.c:(.text+0x28a9): undefined reference to `H5Pcreate' /usr/bin/ld: hdf5open.c:(.text+0x28c2): undefined reference to `H5Pset_fclose_degree' /usr/bin/ld: hdf5open.c:(.text+0x28ee): undefined reference to `H5Pset_cache' /usr/bin/ld: hdf5open.c:(.text+0x29ae): undefined reference to `H5Aexists' /usr/bin/ld: hdf5open.c:(.text+0x29ef): undefined reference to `H5Pclose' /usr/bin/ld: hdf5open.c:(.text+0x2a11): undefined reference to `H5check_version' /usr/bin/ld: hdf5open.c:(.text+0x2a16): undefined reference to `H5open' /usr/bin/ld: hdf5open.c:(.text+0x2a8a): undefined reference to `H5Pset_fapl_core' /usr/bin/ld: hdf5open.c:(.text+0x2a9d): undefined reference to `H5Fopen' /usr/bin/ld: hdf5open.c:(.text+0x2abf): undefined reference to `H5Pclose' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-hdf5open.o): in function `nc4_get_var_meta': hdf5open.c:(.text+0x2bb5): undefined reference to `H5Dget_access_plist' /usr/bin/ld: hdf5open.c:(.text+0x2bdc): undefined reference to `H5Pget_chunk_cache' /usr/bin/ld: hdf5open.c:(.text+0x2bfb): undefined reference to `H5Dget_create_plist' /usr/bin/ld: hdf5open.c:(.text+0x2c37): undefined reference to `H5Pclose' /usr/bin/ld: hdf5open.c:(.text+0x2c6a): undefined reference to `H5Pclose' /usr/bin/ld: hdf5open.c:(.text+0x2ccf): undefined reference to `H5Pget_filter2' /usr/bin/ld: hdf5open.c:(.text+0x2cfd): undefined reference to `H5Pget_nfilters' /usr/bin/ld: hdf5open.c:(.text+0x2d6b): undefined reference to `H5Pget_filter2' /usr/bin/ld: hdf5open.c:(.text+0x2e14): undefined reference to `H5Pget_filter2' /usr/bin/ld: hdf5open.c:(.text+0x2e3f): undefined reference to `H5Pfill_value_defined' /usr/bin/ld: hdf5open.c:(.text+0x2eac): undefined reference to `H5Pget_fill_value' /usr/bin/ld: hdf5open.c:(.text+0x2f65): undefined reference to `H5Pclose' /usr/bin/ld: hdf5open.c:(.text+0x2f7d): undefined reference to `H5Pclose' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-hdf5open.o): in function `nc4_read_atts': hdf5open.c:(.text+0x2fd0): undefined reference to `H5Aiterate2' /usr/bin/ld: hdf5open.c:(.text+0x300a): undefined reference to `H5Aiterate2' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-hdf5type.o): in function `NC4_inq_type_equal': hdf5type.c:(.text+0x2ce): undefined reference to `H5Tequal' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-hdf5var.o): in function `nc4_reopen_dataset': hdf5var.c:(.text+0xd04): undefined reference to `H5open' /usr/bin/ld: hdf5var.c:(.text+0xd0b): undefined reference to `H5P_CLS_DATASET_ACCESS_ID_g' /usr/bin/ld: hdf5var.c:(.text+0xd10): undefined reference to `H5Pcreate' /usr/bin/ld: hdf5var.c:(.text+0xd3a): undefined reference to `H5Pset_chunk_cache' /usr/bin/ld: hdf5var.c:(.text+0xd47): undefined reference to `H5Dclose' /usr/bin/ld: hdf5var.c:(.text+0xd5a): undefined reference to `H5Dopen2' /usr/bin/ld: hdf5var.c:(.text+0xd6b): undefined reference to `H5Pclose' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-hdf5var.o): in function `NC4_def_var': hdf5var.c:(.text+0x1027): undefined reference to `H5Tget_native_type' /usr/bin/ld: hdf5var.c:(.text+0x121d): undefined reference to `H5Dclose' /usr/bin/ld: hdf5var.c:(.text+0x1247): undefined reference to `H5Gunlink' /usr/bin/ld: hdf5var.c:(.text+0x13af): undefined reference to `H5Tget_class' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-hdf5var.o): in function `NC4_rename_var': hdf5var.c:(.text+0x196c): undefined reference to `H5Lmove' /usr/bin/ld: hdf5var.c:(.text+0x19dd): undefined reference to `H5Lmove' /usr/bin/ld: hdf5var.c:(.text+0x1a01): undefined reference to `H5Lmove' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-hdf5var.o): in function `NC4_put_vars': hdf5var.c:(.text+0x1df3): undefined reference to `H5Dget_space' /usr/bin/ld: hdf5var.c:(.text+0x1e17): undefined reference to `H5Sget_simple_extent_dims' /usr/bin/ld: hdf5var.c:(.text+0x1ef4): undefined reference to `H5Sget_simple_extent_type' /usr/bin/ld: hdf5var.c:(.text+0x1f29): undefined reference to `H5Sselect_hyperslab' /usr/bin/ld: hdf5var.c:(.text+0x1f49): undefined reference to `H5Screate_simple' /usr/bin/ld: hdf5var.c:(.text+0x1fc1): undefined reference to `H5open' /usr/bin/ld: hdf5var.c:(.text+0x1fc8): undefined reference to `H5P_CLS_DATASET_XFER_ID_g' /usr/bin/ld: hdf5var.c:(.text+0x1fcd): undefined reference to `H5Pcreate' /usr/bin/ld: hdf5var.c:(.text+0x206f): undefined reference to `H5Dwrite' /usr/bin/ld: hdf5var.c:(.text+0x20c2): undefined reference to `H5Sclose' /usr/bin/ld: hdf5var.c:(.text+0x20dc): undefined reference to `H5Sclose' /usr/bin/ld: hdf5var.c:(.text+0x20f9): undefined reference to `H5Pclose' /usr/bin/ld: hdf5var.c:(.text+0x216f): undefined reference to `H5Sclose' /usr/bin/ld: hdf5var.c:(.text+0x2183): undefined reference to `H5Screate' /usr/bin/ld: hdf5var.c:(.text+0x2361): undefined reference to `H5Dset_extent' /usr/bin/ld: hdf5var.c:(.text+0x2394): undefined reference to `H5Sclose' /usr/bin/ld: hdf5var.c:(.text+0x23c6): undefined reference to `H5Dget_space' /usr/bin/ld: hdf5var.c:(.text+0x23f1): undefined reference to `H5Sselect_hyperslab' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-hdf5var.o): in function `NC4_get_vars': hdf5var.c:(.text+0x270c): undefined reference to `H5Dget_space' /usr/bin/ld: hdf5var.c:(.text+0x2791): undefined reference to `H5Sget_simple_extent_dims' /usr/bin/ld: hdf5var.c:(.text+0x2931): undefined reference to `H5Sclose' /usr/bin/ld: hdf5var.c:(.text+0x2a68): undefined reference to `H5Sclose' /usr/bin/ld: hdf5var.c:(.text+0x2a7f): undefined reference to `H5Sclose' /usr/bin/ld: hdf5var.c:(.text+0x2a97): undefined reference to `H5Pclose' /usr/bin/ld: hdf5var.c:(.text+0x2ada): undefined reference to `H5Sget_simple_extent_type' /usr/bin/ld: hdf5var.c:(.text+0x2ae9): undefined reference to `H5Screate' /usr/bin/ld: hdf5var.c:(.text+0x2b4c): undefined reference to `H5open' /usr/bin/ld: hdf5var.c:(.text+0x2b53): undefined reference to `H5P_CLS_DATASET_XFER_ID_g' /usr/bin/ld: hdf5var.c:(.text+0x2b58): undefined reference to `H5Pcreate' /usr/bin/ld: hdf5var.c:(.text+0x2ba8): undefined reference to `H5Dread' /usr/bin/ld: hdf5var.c:(.text+0x2d2f): undefined reference to `H5Sselect_hyperslab' /usr/bin/ld: hdf5var.c:(.text+0x2d4f): undefined reference to `H5Screate_simple' /usr/bin/ld: hdf5var.c:(.text+0x2e56): undefined reference to `H5Tget_size' /usr/bin/ld: hdf5var.c:(.text+0x2f3b): undefined reference to `H5Tis_variable_str' /usr/bin/ld: hdf5var.c:(.text+0x2f53): undefined reference to `H5Tget_size' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-nc4hdf.o): in function `write_netcdf4_dimid': nc4hdf.c:(.text+0x42): undefined reference to `H5Screate' /usr/bin/ld: nc4hdf.c:(.text+0x5b): undefined reference to `H5Aexists' /usr/bin/ld: nc4hdf.c:(.text+0x7c): undefined reference to `H5Aopen_by_name' /usr/bin/ld: nc4hdf.c:(.text+0x8d): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0x94): undefined reference to `H5T_NATIVE_INT_g' /usr/bin/ld: nc4hdf.c:(.text+0xa1): undefined reference to `H5Awrite' /usr/bin/ld: nc4hdf.c:(.text+0xae): undefined reference to `H5Sclose' /usr/bin/ld: nc4hdf.c:(.text+0xc3): undefined reference to `H5Aclose' /usr/bin/ld: nc4hdf.c:(.text+0xe1): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0xf3): undefined reference to `H5T_NATIVE_INT_g' /usr/bin/ld: nc4hdf.c:(.text+0xfb): undefined reference to `H5Acreate1' /usr/bin/ld: nc4hdf.c:(.text+0x10f): undefined reference to `H5Sclose' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-nc4hdf.o): in function `NC4_walk': nc4hdf.c:(.text+0x13f): undefined reference to `H5Gget_num_objs' /usr/bin/ld: nc4hdf.c:(.text+0x170): undefined reference to `H5Gget_objname_by_idx' /usr/bin/ld: nc4hdf.c:(.text+0x186): undefined reference to `H5Gget_objtype_by_idx' /usr/bin/ld: nc4hdf.c:(.text+0x1c0): undefined reference to `H5Dopen1' /usr/bin/ld: nc4hdf.c:(.text+0x1cb): undefined reference to `H5Aget_num_attrs' /usr/bin/ld: nc4hdf.c:(.text+0x1e6): undefined reference to `H5Aopen_idx' /usr/bin/ld: nc4hdf.c:(.text+0x1fe): undefined reference to `H5Aget_name' /usr/bin/ld: nc4hdf.c:(.text+0x21f): undefined reference to `H5Aclose' /usr/bin/ld: nc4hdf.c:(.text+0x22d): undefined reference to `H5Dclose' /usr/bin/ld: nc4hdf.c:(.text+0x261): undefined reference to `H5Gopen1' /usr/bin/ld: nc4hdf.c:(.text+0x277): undefined reference to `H5Gclose' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-nc4hdf.o): in function `var_exists': nc4hdf.c:(.text+0x38a): undefined reference to `H5Lexists' /usr/bin/ld: nc4hdf.c:(.text+0x3af): undefined reference to `H5Gget_objinfo' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-nc4hdf.o): in function `rec_reattach_scales': nc4hdf.c:(.text+0x50f): undefined reference to `H5DSattach_scale' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-nc4hdf.o): in function `rec_detach_scales': nc4hdf.c:(.text+0x708): undefined reference to `H5DSdetach_scale' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-nc4hdf.o): in function `nc4_open_var_grp2': nc4hdf.c:(.text+0x814): undefined reference to `H5Dopen2' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-nc4hdf.o): in function `nc4_get_hdf_typeid': nc4hdf.c:(.text+0xab6): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0xabd): undefined reference to `H5T_C_S1_g' /usr/bin/ld: nc4hdf.c:(.text+0xac2): undefined reference to `H5Tcopy' /usr/bin/ld: nc4hdf.c:(.text+0xadd): undefined reference to `H5Tset_size' /usr/bin/ld: nc4hdf.c:(.text+0xaee): undefined reference to `H5Tset_cset' /usr/bin/ld: nc4hdf.c:(.text+0xb09): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0xb10): undefined reference to `H5T_C_S1_g' /usr/bin/ld: nc4hdf.c:(.text+0xb15): undefined reference to `H5Tcopy' /usr/bin/ld: nc4hdf.c:(.text+0xb27): undefined reference to `H5Tset_strpad' /usr/bin/ld: nc4hdf.c:(.text+0xb35): undefined reference to `H5Tset_cset' /usr/bin/ld: nc4hdf.c:(.text+0xb49): undefined reference to `H5Tclose' /usr/bin/ld: nc4hdf.c:(.text+0xb73): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0xb7a): undefined reference to `H5T_NATIVE_FLOAT_g' /usr/bin/ld: nc4hdf.c:(.text+0xb8a): undefined reference to `H5Tcopy' /usr/bin/ld: nc4hdf.c:(.text+0xbc3): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0xbca): undefined reference to `H5T_NATIVE_DOUBLE_g' /usr/bin/ld: nc4hdf.c:(.text+0xbe3): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0xbea): undefined reference to `H5T_NATIVE_UCHAR_g' /usr/bin/ld: nc4hdf.c:(.text+0xc03): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0xc0a): undefined reference to `H5T_NATIVE_USHORT_g' /usr/bin/ld: nc4hdf.c:(.text+0xc2b): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0xc32): undefined reference to `H5T_NATIVE_ULLONG_g' /usr/bin/ld: nc4hdf.c:(.text+0xc53): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0xc5a): undefined reference to `H5T_NATIVE_SCHAR_g' /usr/bin/ld: nc4hdf.c:(.text+0xc7b): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0xc82): undefined reference to `H5T_NATIVE_UINT_g' /usr/bin/ld: nc4hdf.c:(.text+0xca3): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0xcaa): undefined reference to `H5T_NATIVE_LLONG_g' /usr/bin/ld: nc4hdf.c:(.text+0xcc7): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0xcce): undefined reference to `H5T_NATIVE_SHORT_g' /usr/bin/ld: nc4hdf.c:(.text+0xcf3): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0xcfa): undefined reference to `H5T_NATIVE_INT_g' /usr/bin/ld: nc4hdf.c:(.text+0xd39): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0xd40): undefined reference to `H5T_STD_I16BE_g' /usr/bin/ld: nc4hdf.c:(.text+0xd51): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0xd58): undefined reference to `H5T_STD_U32BE_g' /usr/bin/ld: nc4hdf.c:(.text+0xd69): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0xd70): undefined reference to `H5T_STD_U64BE_g' /usr/bin/ld: nc4hdf.c:(.text+0xd81): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0xd88): undefined reference to `H5T_IEEE_F64BE_g' /usr/bin/ld: nc4hdf.c:(.text+0xd99): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0xda0): undefined reference to `H5T_STD_I8BE_g' /usr/bin/ld: nc4hdf.c:(.text+0xdb1): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0xdb8): undefined reference to `H5T_STD_U16BE_g' /usr/bin/ld: nc4hdf.c:(.text+0xdc9): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0xdd0): undefined reference to `H5T_STD_I64BE_g' /usr/bin/ld: nc4hdf.c:(.text+0xde1): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0xde8): undefined reference to `H5T_STD_U8BE_g' /usr/bin/ld: nc4hdf.c:(.text+0xdf9): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0xe00): undefined reference to `H5T_IEEE_F32BE_g' /usr/bin/ld: nc4hdf.c:(.text+0xe11): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0xe18): undefined reference to `H5T_STD_I32BE_g' /usr/bin/ld: nc4hdf.c:(.text+0xe33): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0xe3a): undefined reference to `H5T_STD_I32LE_g' /usr/bin/ld: nc4hdf.c:(.text+0xe44): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0xe4b): undefined reference to `H5T_STD_U8LE_g' /usr/bin/ld: nc4hdf.c:(.text+0xe55): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0xe5c): undefined reference to `H5T_IEEE_F32LE_g' /usr/bin/ld: nc4hdf.c:(.text+0xe66): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0xe6d): undefined reference to `H5T_STD_U16LE_g' /usr/bin/ld: nc4hdf.c:(.text+0xe77): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0xe7e): undefined reference to `H5T_STD_I64LE_g' /usr/bin/ld: nc4hdf.c:(.text+0xe88): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0xe8f): undefined reference to `H5T_IEEE_F64LE_g' /usr/bin/ld: nc4hdf.c:(.text+0xe99): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0xea0): undefined reference to `H5T_STD_I8LE_g' /usr/bin/ld: nc4hdf.c:(.text+0xeaa): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0xeb1): undefined reference to `H5T_STD_U32LE_g' /usr/bin/ld: nc4hdf.c:(.text+0xebb): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0xec2): undefined reference to `H5T_STD_U64LE_g' /usr/bin/ld: nc4hdf.c:(.text+0xecc): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0xed3): undefined reference to `H5T_STD_I16LE_g' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-nc4hdf.o): in function `write_attlist': nc4hdf.c:(.text+0x104d): undefined reference to `H5Screate' /usr/bin/ld: nc4hdf.c:(.text+0x106d): undefined reference to `H5Aexists' /usr/bin/ld: nc4hdf.c:(.text+0x108a): undefined reference to `H5Aopen' /usr/bin/ld: nc4hdf.c:(.text+0x10a3): undefined reference to `H5Aget_type' /usr/bin/ld: nc4hdf.c:(.text+0x10b9): undefined reference to `H5Aget_space' /usr/bin/ld: nc4hdf.c:(.text+0x10cd): undefined reference to `H5Sget_simple_extent_npoints' /usr/bin/ld: nc4hdf.c:(.text+0x10ea): undefined reference to `H5Tequal' /usr/bin/ld: nc4hdf.c:(.text+0x111c): undefined reference to `H5Adelete' /usr/bin/ld: nc4hdf.c:(.text+0x1140): undefined reference to `H5Acreate1' /usr/bin/ld: nc4hdf.c:(.text+0x1163): undefined reference to `H5Awrite' /usr/bin/ld: nc4hdf.c:(.text+0x11f3): undefined reference to `H5Tclose' /usr/bin/ld: nc4hdf.c:(.text+0x1210): undefined reference to `H5Aclose' /usr/bin/ld: nc4hdf.c:(.text+0x1226): undefined reference to `H5Sclose' /usr/bin/ld: nc4hdf.c:(.text+0x1237): undefined reference to `H5Sclose' /usr/bin/ld: nc4hdf.c:(.text+0x1269): undefined reference to `H5Sclose' /usr/bin/ld: nc4hdf.c:(.text+0x12bd): undefined reference to `H5Screate_simple' /usr/bin/ld: nc4hdf.c:(.text+0x12fb): undefined reference to `H5Acreate1' /usr/bin/ld: nc4hdf.c:(.text+0x1321): undefined reference to `H5Awrite' /usr/bin/ld: nc4hdf.c:(.text+0x135d): undefined reference to `H5Aclose' /usr/bin/ld: nc4hdf.c:(.text+0x137e): undefined reference to `H5Tclose' /usr/bin/ld: nc4hdf.c:(.text+0x13de): undefined reference to `H5Screate' /usr/bin/ld: nc4hdf.c:(.text+0x1409): undefined reference to `H5Tset_size' /usr/bin/ld: nc4hdf.c:(.text+0x141d): undefined reference to `H5Tset_strpad' /usr/bin/ld: nc4hdf.c:(.text+0x1433): undefined reference to `H5Screate' /usr/bin/ld: nc4hdf.c:(.text+0x14a3): undefined reference to `H5Tclose' /usr/bin/ld: nc4hdf.c:(.text+0x14cf): undefined reference to `H5Tclose' /usr/bin/ld: nc4hdf.c:(.text+0x1503): undefined reference to `H5Awrite' /usr/bin/ld: nc4hdf.c:(.text+0x156a): undefined reference to `H5Tclose' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-nc4hdf.o): in function `var_create_dataset': nc4hdf.c:(.text+0x15f7): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0x15fe): undefined reference to `H5P_CLS_DATASET_CREATE_ID_g' /usr/bin/ld: nc4hdf.c:(.text+0x1603): undefined reference to `H5Pcreate' /usr/bin/ld: nc4hdf.c:(.text+0x1614): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0x161b): undefined reference to `H5P_CLS_DATASET_ACCESS_ID_g' /usr/bin/ld: nc4hdf.c:(.text+0x1620): undefined reference to `H5Pcreate' /usr/bin/ld: nc4hdf.c:(.text+0x1638): undefined reference to `H5Pset_obj_track_times' /usr/bin/ld: nc4hdf.c:(.text+0x1681): undefined reference to `H5Pset_fill_time' /usr/bin/ld: nc4hdf.c:(.text+0x16e9): undefined reference to `H5Pset_chunk' /usr/bin/ld: nc4hdf.c:(.text+0x1713): undefined reference to `H5Tclose' /usr/bin/ld: nc4hdf.c:(.text+0x172a): undefined reference to `H5Pclose' /usr/bin/ld: nc4hdf.c:(.text+0x1746): undefined reference to `H5Pclose' /usr/bin/ld: nc4hdf.c:(.text+0x175d): undefined reference to `H5Sclose' /usr/bin/ld: nc4hdf.c:(.text+0x1862): undefined reference to `H5Pset_fill_value' /usr/bin/ld: nc4hdf.c:(.text+0x1877): undefined reference to `H5Tclose' /usr/bin/ld: nc4hdf.c:(.text+0x18a4): undefined reference to `H5Pset_shuffle' /usr/bin/ld: nc4hdf.c:(.text+0x18c3): undefined reference to `H5Pset_deflate' /usr/bin/ld: nc4hdf.c:(.text+0x1b6f): undefined reference to `H5Pset_layout' /usr/bin/ld: nc4hdf.c:(.text+0x1b90): undefined reference to `H5Screate_simple' /usr/bin/ld: nc4hdf.c:(.text+0x1ba9): undefined reference to `H5Pset_attr_creation_order' /usr/bin/ld: nc4hdf.c:(.text+0x1bfc): undefined reference to `H5Dcreate2' /usr/bin/ld: nc4hdf.c:(.text+0x1c4e): undefined reference to `H5DSset_scale' /usr/bin/ld: nc4hdf.c:(.text+0x1c94): undefined reference to `H5Aclose' /usr/bin/ld: nc4hdf.c:(.text+0x1cf4): undefined reference to `H5Pset_fletcher32' /usr/bin/ld: nc4hdf.c:(.text+0x1d0b): undefined reference to `H5Screate' /usr/bin/ld: nc4hdf.c:(.text+0x1d2d): undefined reference to `H5Pset_filter' /usr/bin/ld: nc4hdf.c:(.text+0x1d49): undefined reference to `H5Pset_fill_value' /usr/bin/ld: nc4hdf.c:(.text+0x1d7d): undefined reference to `H5Screate_simple' /usr/bin/ld: nc4hdf.c:(.text+0x1d90): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0x1da2): undefined reference to `H5T_NATIVE_INT_g' /usr/bin/ld: nc4hdf.c:(.text+0x1daf): undefined reference to `H5Acreate1' /usr/bin/ld: nc4hdf.c:(.text+0x1dd0): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0x1ddc): undefined reference to `H5T_NATIVE_INT_g' /usr/bin/ld: nc4hdf.c:(.text+0x1df2): undefined reference to `H5Awrite' /usr/bin/ld: nc4hdf.c:(.text+0x1e05): undefined reference to `H5Sclose' /usr/bin/ld: nc4hdf.c:(.text+0x1e1a): undefined reference to `H5Aclose' /usr/bin/ld: nc4hdf.c:(.text+0x1e42): undefined reference to `H5Tclose' /usr/bin/ld: nc4hdf.c:(.text+0x1e60): undefined reference to `H5Pset_szip' /usr/bin/ld: nc4hdf.c:(.text+0x1e8b): undefined reference to `H5Pset_chunk_cache' /usr/bin/ld: nc4hdf.c:(.text+0x1ee0): undefined reference to `H5Sclose' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-nc4hdf.o): in function `commit_type': nc4hdf.c:(.text+0x1ff4): undefined reference to `H5Tenum_create' /usr/bin/ld: nc4hdf.c:(.text+0x203e): undefined reference to `H5Tenum_insert' /usr/bin/ld: nc4hdf.c:(.text+0x2067): undefined reference to `H5Tcommit1' /usr/bin/ld: nc4hdf.c:(.text+0x207d): undefined reference to `H5Tget_native_type' /usr/bin/ld: nc4hdf.c:(.text+0x20be): undefined reference to `H5Tvlen_create' /usr/bin/ld: nc4hdf.c:(.text+0x20ea): undefined reference to `H5Tcreate' /usr/bin/ld: nc4hdf.c:(.text+0x2174): undefined reference to `H5Tinsert' /usr/bin/ld: nc4hdf.c:(.text+0x2184): undefined reference to `H5Tclose' /usr/bin/ld: nc4hdf.c:(.text+0x21da): undefined reference to `H5Tarray_create1' /usr/bin/ld: nc4hdf.c:(.text+0x21ec): undefined reference to `H5Tclose' /usr/bin/ld: nc4hdf.c:(.text+0x220a): undefined reference to `H5Tcreate' /usr/bin/ld: nc4hdf.c:(.text+0x2241): undefined reference to `H5Tclose' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-nc4hdf.o): in function `nc4_create_dim_wo_var': nc4hdf.c:(.text+0x2363): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0x236a): undefined reference to `H5P_CLS_DATASET_CREATE_ID_g' /usr/bin/ld: nc4hdf.c:(.text+0x236f): undefined reference to `H5Pcreate' /usr/bin/ld: nc4hdf.c:(.text+0x2385): undefined reference to `H5Pset_obj_track_times' /usr/bin/ld: nc4hdf.c:(.text+0x23bd): undefined reference to `H5Pset_chunk' /usr/bin/ld: nc4hdf.c:(.text+0x23d9): undefined reference to `H5Screate_simple' /usr/bin/ld: nc4hdf.c:(.text+0x23f2): undefined reference to `H5Pset_attr_creation_order' /usr/bin/ld: nc4hdf.c:(.text+0x23fb): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0x240f): undefined reference to `H5T_IEEE_F32BE_g' /usr/bin/ld: nc4hdf.c:(.text+0x241d): undefined reference to `H5Dcreate2' /usr/bin/ld: nc4hdf.c:(.text+0x244f): undefined reference to `H5DSset_scale' /usr/bin/ld: nc4hdf.c:(.text+0x247e): undefined reference to `H5Sclose' /usr/bin/ld: nc4hdf.c:(.text+0x249e): undefined reference to `H5Pclose' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-nc4hdf.o): in function `nc4_rec_write_metadata': nc4hdf.c:(.text+0x274a): undefined reference to `H5DSdetach_scale' /usr/bin/ld: nc4hdf.c:(.text+0x29d6): undefined reference to `H5Dset_extent' /usr/bin/ld: nc4hdf.c:(.text+0x2a4e): undefined reference to `H5Dclose' /usr/bin/ld: nc4hdf.c:(.text+0x2a6f): undefined reference to `H5Gunlink' /usr/bin/ld: nc4hdf.c:(.text+0x2bcd): undefined reference to `H5Aexists' /usr/bin/ld: nc4hdf.c:(.text+0x2be0): undefined reference to `H5Adelete' /usr/bin/ld: nc4hdf.c:(.text+0x2bf1): undefined reference to `H5Aexists' /usr/bin/ld: nc4hdf.c:(.text+0x2c04): undefined reference to `H5Adelete' /usr/bin/ld: nc4hdf.c:(.text+0x2c15): undefined reference to `H5Aexists' /usr/bin/ld: nc4hdf.c:(.text+0x2c2c): undefined reference to `H5Adelete' /usr/bin/ld: nc4hdf.c:(.text+0x2da2): undefined reference to `H5DSattach_scale' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-nc4hdf.o): in function `nc4_rec_write_groups_types': nc4hdf.c:(.text+0x3112): undefined reference to `H5Aexists' /usr/bin/ld: nc4hdf.c:(.text+0x312a): undefined reference to `H5Screate' /usr/bin/ld: nc4hdf.c:(.text+0x3137): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0x3147): undefined reference to `H5T_NATIVE_INT_g' /usr/bin/ld: nc4hdf.c:(.text+0x3151): undefined reference to `H5Acreate1' /usr/bin/ld: nc4hdf.c:(.text+0x3162): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0x3169): undefined reference to `H5T_NATIVE_INT_g' /usr/bin/ld: nc4hdf.c:(.text+0x3176): undefined reference to `H5Awrite' /usr/bin/ld: nc4hdf.c:(.text+0x3198): undefined reference to `H5Aclose' /usr/bin/ld: nc4hdf.c:(.text+0x31d2): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0x31d9): undefined reference to `H5P_CLS_GROUP_CREATE_ID_g' /usr/bin/ld: nc4hdf.c:(.text+0x31de): undefined reference to `H5Pcreate' /usr/bin/ld: nc4hdf.c:(.text+0x31f0): undefined reference to `H5Pset_obj_track_times' /usr/bin/ld: nc4hdf.c:(.text+0x3201): undefined reference to `H5Pset_link_creation_order' /usr/bin/ld: nc4hdf.c:(.text+0x3212): undefined reference to `H5Pset_attr_creation_order' /usr/bin/ld: nc4hdf.c:(.text+0x322b): undefined reference to `H5Gcreate2' /usr/bin/ld: nc4hdf.c:(.text+0x323b): undefined reference to `H5Pclose' /usr/bin/ld: nc4hdf.c:(.text+0x3254): undefined reference to `H5Pclose' /usr/bin/ld: nc4hdf.c:(.text+0x3275): undefined reference to `H5Gclose' /usr/bin/ld: nc4hdf.c:(.text+0x3288): undefined reference to `H5Sclose' /usr/bin/ld: nc4hdf.c:(.text+0x329b): undefined reference to `H5Sclose' /usr/bin/ld: nc4hdf.c:(.text+0x32b0): undefined reference to `H5Aclose' /usr/bin/ld: nc4hdf.c:(.text+0x32db): undefined reference to `H5Aclose' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-nc4hdf.o): in function `nc4_rec_match_dimscales': nc4hdf.c:(.text+0x35ee): undefined reference to `H5Dget_space' /usr/bin/ld: nc4hdf.c:(.text+0x360f): undefined reference to `H5Sget_simple_extent_type' /usr/bin/ld: nc4hdf.c:(.text+0x3622): undefined reference to `H5Sclose' /usr/bin/ld: nc4hdf.c:(.text+0x37a1): undefined reference to `H5Sget_simple_extent_dims' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-nc4hdf.o): in function `reportobject': nc4hdf.c:(.text+0x397a): undefined reference to `H5Iget_name' /usr/bin/ld: nc4hdf.c:(.text+0x3a0c): undefined reference to `H5Aget_name' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-nc4hdf.o): in function `reportopenobjectsT.constprop.8': nc4hdf.c:(.text+0x3a7b): undefined reference to `H5Fget_obj_count' /usr/bin/ld: nc4hdf.c:(.text+0x3ab4): undefined reference to `H5Fget_obj_ids' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-nc4hdf.o): in function `NC4_hdf5get_libversion': nc4hdf.c:(.text+0x3c75): undefined reference to `H5get_libversion' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-nc4hdf.o): in function `NC4_hdf5get_superblock': nc4hdf.c:(.text+0x3cad): undefined reference to `H5Fget_create_plist' /usr/bin/ld: nc4hdf.c:(.text+0x3cc9): undefined reference to `H5Pget_version' /usr/bin/ld: nc4hdf.c:(.text+0x3ce4): undefined reference to `H5Pclose' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-nc4hdf.o): in function `NC4_isnetcdf4': nc4hdf.c:(.text+0x3d4a): undefined reference to `H5Aopen_name' /usr/bin/ld: nc4hdf.c:(.text+0x3d55): undefined reference to `H5Aclose' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-nc4hdf.o): in function `nc4_filter_action': nc4hdf.c:(.text+0x3e15): undefined reference to `H5Zunregister' /usr/bin/ld: nc4hdf.c:(.text+0x3eba): undefined reference to `H5Zregister' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-nc4info.o): in function `NC4_read_provenance': nc4info.c:(.text+0x28b): undefined reference to `H5Aexists' /usr/bin/ld: nc4info.c:(.text+0x2a0): undefined reference to `H5Aopen_name' /usr/bin/ld: nc4info.c:(.text+0x2b4): undefined reference to `H5Aget_space' /usr/bin/ld: nc4info.c:(.text+0x2c0): undefined reference to `H5Aget_type' /usr/bin/ld: nc4info.c:(.text+0x2cb): undefined reference to `H5Tget_class' /usr/bin/ld: nc4info.c:(.text+0x2f1): undefined reference to `H5Aclose' /usr/bin/ld: nc4info.c:(.text+0x307): undefined reference to `H5Sclose' /usr/bin/ld: nc4info.c:(.text+0x31a): undefined reference to `H5Tclose' /usr/bin/ld: nc4info.c:(.text+0x32f): undefined reference to `H5Tclose' /usr/bin/ld: nc4info.c:(.text+0x374): undefined reference to `H5Tget_size' /usr/bin/ld: nc4info.c:(.text+0x39d): undefined reference to `H5Tget_native_type' /usr/bin/ld: nc4info.c:(.text+0x3b3): undefined reference to `H5Aread' /usr/bin/ld: nc4info.c:(.text+0x3dd): undefined reference to `H5Tclose' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-nc4info.o): in function `NC4_write_provenance': nc4info.c:(.text+0x48f): undefined reference to `H5Aexists' /usr/bin/ld: nc4info.c:(.text+0x4a7): undefined reference to `H5open' /usr/bin/ld: nc4info.c:(.text+0x4ae): undefined reference to `H5T_C_S1_g' /usr/bin/ld: nc4info.c:(.text+0x4b3): undefined reference to `H5Tcopy' /usr/bin/ld: nc4info.c:(.text+0x4c9): undefined reference to `H5Tset_strpad' /usr/bin/ld: nc4info.c:(.text+0x4db): undefined reference to `H5Tset_cset' /usr/bin/ld: nc4info.c:(.text+0x4f7): undefined reference to `H5Tset_size' /usr/bin/ld: nc4info.c:(.text+0x506): undefined reference to `H5Screate' /usr/bin/ld: nc4info.c:(.text+0x528): undefined reference to `H5Acreate1' /usr/bin/ld: nc4info.c:(.text+0x543): undefined reference to `H5Awrite' /usr/bin/ld: nc4info.c:(.text+0x55e): undefined reference to `H5Aclose' /usr/bin/ld: nc4info.c:(.text+0x573): undefined reference to `H5Sclose' /usr/bin/ld: nc4info.c:(.text+0x588): undefined reference to `H5Tclose' /usr/bin/ld: nc4info.c:(.text+0x5ce): undefined reference to `H5Tclose' /usr/bin/ld: nc4info.c:(.text+0x5fe): undefined reference to `H5Sclose' /usr/bin/ld: nc4info.c:(.text+0x613): undefined reference to `H5Tclose' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-nc4memcb.o): in function `NC4_image_init': nc4memcb.c:(.text+0x3d6): undefined reference to `H5open' /usr/bin/ld: nc4memcb.c:(.text+0x3dd): undefined reference to `H5P_CLS_FILE_ACCESS_ID_g' /usr/bin/ld: nc4memcb.c:(.text+0x3e2): undefined reference to `H5Pcreate' /usr/bin/ld: nc4memcb.c:(.text+0x429): undefined reference to `H5Pset_fapl_core' /usr/bin/ld: nc4memcb.c:(.text+0x4ba): undefined reference to `H5Pset_file_image_callbacks' /usr/bin/ld: nc4memcb.c:(.text+0x4d1): undefined reference to `H5Pset_file_image' /usr/bin/ld: nc4memcb.c:(.text+0x522): undefined reference to `H5check_version' /usr/bin/ld: nc4memcb.c:(.text+0x527): undefined reference to `H5open' /usr/bin/ld: nc4memcb.c:(.text+0x537): undefined reference to `H5Fopen' /usr/bin/ld: nc4memcb.c:(.text+0x556): undefined reference to `H5Eauto_is_v2' /usr/bin/ld: nc4memcb.c:(.text+0x56d): undefined reference to `H5Eget_auto1' /usr/bin/ld: nc4memcb.c:(.text+0x576): undefined reference to `H5Eset_auto1' /usr/bin/ld: nc4memcb.c:(.text+0x583): undefined reference to `H5Pclose' /usr/bin/ld: nc4memcb.c:(.text+0x59f): undefined reference to `H5Eset_auto2' /usr/bin/ld: nc4memcb.c:(.text+0x5cd): undefined reference to `H5Eget_auto2' /usr/bin/ld: nc4memcb.c:(.text+0x5d8): undefined reference to `H5Eset_auto2' /usr/bin/ld: nc4memcb.c:(.text+0x604): undefined reference to `H5Eset_auto1' /usr/bin/ld: nc4memcb.c:(.text+0x611): undefined reference to `H5check_version' /usr/bin/ld: nc4memcb.c:(.text+0x616): undefined reference to `H5open' /usr/bin/ld: nc4memcb.c:(.text+0x62a): undefined reference to `H5Fcreate' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-hdf5attr.o): in function `NC4_HDF5_rename_att': hdf5attr.c:(.text+0x3ed): undefined reference to `H5Adelete' /usr/bin/ld: hdf5attr.c:(.text+0x55d): undefined reference to `H5Adelete' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-hdf5attr.o): in function `NC4_HDF5_del_att': hdf5attr.c:(.text+0x6bf): undefined reference to `H5Adelete' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-hdf5create.o): in function `NC4_create': hdf5create.c:(.text+0x12d): undefined reference to `H5check_version' /usr/bin/ld: hdf5create.c:(.text+0x132): undefined reference to `H5open' /usr/bin/ld: hdf5create.c:(.text+0x171): undefined reference to `H5Pclose' /usr/bin/ld: hdf5create.c:(.text+0x1d8): undefined reference to `H5check_version' /usr/bin/ld: hdf5create.c:(.text+0x1dd): undefined reference to `H5open' /usr/bin/ld: hdf5create.c:(.text+0x1e8): undefined reference to `H5open' /usr/bin/ld: hdf5create.c:(.text+0x1ef): undefined reference to `H5P_CLS_FILE_ACCESS_ID_g' /usr/bin/ld: hdf5create.c:(.text+0x1f4): undefined reference to `H5Pcreate' /usr/bin/ld: hdf5create.c:(.text+0x20d): undefined reference to `H5Pset_fclose_degree' /usr/bin/ld: hdf5create.c:(.text+0x239): undefined reference to `H5Pset_cache' /usr/bin/ld: hdf5create.c:(.text+0x250): undefined reference to `H5Pset_libver_bounds' /usr/bin/ld: hdf5create.c:(.text+0x25d): undefined reference to `H5open' /usr/bin/ld: hdf5create.c:(.text+0x264): undefined reference to `H5P_CLS_FILE_CREATE_ID_g' /usr/bin/ld: hdf5create.c:(.text+0x269): undefined reference to `H5Pcreate' /usr/bin/ld: hdf5create.c:(.text+0x281): undefined reference to `H5Pset_obj_track_times' /usr/bin/ld: hdf5create.c:(.text+0x29b): undefined reference to `H5Pset_link_creation_order' /usr/bin/ld: hdf5create.c:(.text+0x2b5): undefined reference to `H5Pset_attr_creation_order' /usr/bin/ld: hdf5create.c:(.text+0x342): undefined reference to `H5Pset_fapl_core' /usr/bin/ld: hdf5create.c:(.text+0x366): undefined reference to `H5Fcreate' /usr/bin/ld: hdf5create.c:(.text+0x38d): undefined reference to `H5Gopen2' /usr/bin/ld: hdf5create.c:(.text+0x3b0): undefined reference to `H5Pclose' /usr/bin/ld: hdf5create.c:(.text+0x3c5): undefined reference to `H5Pclose' /usr/bin/ld: hdf5create.c:(.text+0x416): undefined reference to `H5check_version' /usr/bin/ld: hdf5create.c:(.text+0x41b): undefined reference to `H5open' collect2: error: ld returned 1 exit status make[2]: *** [tools/CMakeFiles/grib_to_netcdf.dir/build.make:94: bin/grib_to_netcdf] Error 1 make[1]: *** [CMakeFiles/Makefile2:1334: tools/CMakeFiles/grib_to_netcdf.dir/all] Error 2 make: *** [Makefile:163: all] Error 2 Test project /home/mohapatra/ROPP_dir/eccodes-2.23.0-Source/tmpbuild Start 1: eccodes_t_unit_tests 1/59 Test #1: eccodes_t_unit_tests ......................***Failed 0.01 sec Start 2: eccodes_t_julian 2/59 Test #2: eccodes_t_julian ..........................***Failed 0.01 sec Start 3: eccodes_t_grib_dump_samples 3/59 Test #3: eccodes_t_grib_dump_samples ...............***Failed 0.01 sec Start 4: eccodes_t_bufr_dump_samples 4/59 Test #4: eccodes_t_bufr_dump_samples ...............***Failed 0.01 sec Start 5: eccodes_t_bufr_check_descriptors 5/59 Test #5: eccodes_t_bufr_check_descriptors ..........***Failed 0.04 sec Start 6: eccodes_t_definitions 6/59 Test #6: eccodes_t_definitions .....................***Failed 0.01 sec Start 7: eccodes_t_grib2_version 7/59 Test #7: eccodes_t_grib2_version ...................***Failed 0.01 sec Start 8: eccodes_t_grib_calendar 8/59 Test #8: eccodes_t_grib_calendar ...................***Failed 0.01 sec Start 9: eccodes_t_grib_md5 9/59 Test #9: eccodes_t_grib_md5 ........................***Failed 0.01 sec Start 10: eccodes_t_grib_cfNames 10/59 Test #10: eccodes_t_grib_cfNames ....................***Failed 0.01 sec Start 11: eccodes_t_grib_packing_order 11/59 Test #11: eccodes_t_grib_packing_order ..............***Failed 0.01 sec Start 12: eccodes_t_filter_substr 12/59 Test #12: eccodes_t_filter_substr ...................***Failed 0.01 sec Start 13: eccodes_t_grib_uerra 13/59 Test #13: eccodes_t_grib_uerra ......................***Failed 0.01 sec Start 14: eccodes_t_grib_element 14/59 Test #14: eccodes_t_grib_element ....................***Failed 0.01 sec Start 15: eccodes_t_grib_2nd_order_numValues 15/59 Test #15: eccodes_t_grib_2nd_order_numValues ........***Failed 0.01 sec Start 16: eccodes_t_grib_ecc-136 16/59 Test #16: eccodes_t_grib_ecc-136 ....................***Failed 0.01 sec Start 17: eccodes_t_grib_ecc-922 17/59 Test #17: eccodes_t_grib_ecc-922 ....................***Failed 0.01 sec Start 18: eccodes_t_grib_ecc-966 18/59 Test #18: eccodes_t_grib_ecc-966 ....................***Failed 0.01 sec Start 19: eccodes_t_grib_ecc-967 19/59 Test #19: eccodes_t_grib_ecc-967 ....................***Failed 0.01 sec Start 20: eccodes_t_grib_ecc-1150 20/59 Test #20: eccodes_t_grib_ecc-1150 ...................***Failed 0.01 sec Start 21: eccodes_t_grib_ecc-1053 21/59 Test #21: eccodes_t_grib_ecc-1053 ...................***Failed 0.01 sec Start 22: eccodes_t_grib_ecc-1065 22/59 Test #22: eccodes_t_grib_ecc-1065 ...................***Failed 0.01 sec Start 23: eccodes_t_grib_ecc-1167 23/59 Test #23: eccodes_t_grib_ecc-1167 ...................***Failed 0.01 sec Start 24: eccodes_t_grib_ecc-1170 24/59 Test #24: eccodes_t_grib_ecc-1170 ...................***Failed 0.01 sec Start 25: eccodes_t_grib_ecc-1195 25/59 Test #25: eccodes_t_grib_ecc-1195 ...................***Failed 0.01 sec Start 26: eccodes_t_grib_ecc-1212 26/59 Test #26: eccodes_t_grib_ecc-1212 ...................***Failed 0.01 sec Start 27: eccodes_t_grib_ecc-1230 27/59 Test #27: eccodes_t_grib_ecc-1230 ...................***Failed 0.01 sec Start 28: eccodes_t_grib_ecc-1255 28/59 Test #28: eccodes_t_grib_ecc-1255 ...................***Failed 0.01 sec Start 29: eccodes_t_grib_ecc-1258 29/59 Test #29: eccodes_t_grib_ecc-1258 ...................***Failed 0.01 sec Start 30: eccodes_t_grib_ecc-1260 30/59 Test #30: eccodes_t_grib_ecc-1260 ...................***Failed 0.01 sec Start 31: eccodes_t_grib_ecc-1271 31/59 Test #31: eccodes_t_grib_ecc-1271 ...................***Failed 0.01 sec Start 32: eccodes_t_bufr_ecc-1028 32/59 Test #32: eccodes_t_bufr_ecc-1028 ................... Passed 0.04 sec Start 33: eccodes_t_bufr_ecc-1195 33/59 Test #33: eccodes_t_bufr_ecc-1195 ...................***Failed 0.01 sec Start 34: eccodes_t_bufr_ecc-1259 34/59 Test #34: eccodes_t_bufr_ecc-1259 ...................***Failed 0.12 sec Start 35: eccodes_t_bufr_json_samples 35/59 Test #35: eccodes_t_bufr_json_samples ...............***Failed 0.01 sec Start 36: eccodes_t_bufr_ecc-359 36/59 Test #36: eccodes_t_bufr_ecc-359 .................... Passed 0.03 sec Start 37: eccodes_t_bufr_ecc-517 37/59 Test #37: eccodes_t_bufr_ecc-517 ....................***Failed 0.01 sec Start 38: eccodes_t_bufr_rdbSubTypes 38/59 Test #38: eccodes_t_bufr_rdbSubTypes ................***Failed 0.01 sec Start 39: eccodes_t_bufr_templates 39/59 Test #39: eccodes_t_bufr_templates ..................***Failed 0.02 sec Start 40: eccodes_t_grib_efas 40/59 Test #40: eccodes_t_grib_efas .......................***Failed 0.01 sec Start 41: eccodes_t_grib_sh_imag 41/59 Test #41: eccodes_t_grib_sh_imag ....................***Failed 0.01 sec Start 42: eccodes_t_grib_sh_spectral_complex 42/59 Test #42: eccodes_t_grib_sh_spectral_complex ........***Failed 0.01 sec Start 43: eccodes_t_pseudo_diag 43/59 Test #43: eccodes_t_pseudo_diag .....................***Failed 0.01 sec Start 44: eccodes_t_wrap 44/59 Test #44: eccodes_t_wrap ............................***Failed 0.01 sec Start 45: eccodes_t_grib_levtype 45/59 Test #45: eccodes_t_grib_levtype ....................***Failed 0.01 sec Start 46: eccodes_t_grib_grid_unstructured 46/59 Test #46: eccodes_t_grib_grid_unstructured ..........***Failed 0.01 sec Start 47: eccodes_t_grib_grid_lambert_conformal 47/59 Test #47: eccodes_t_grib_grid_lambert_conformal .....***Failed 0.01 sec Start 48: eccodes_t_grib_grid_polar_stereographic 48/59 Test #48: eccodes_t_grib_grid_polar_stereographic ...***Failed 0.01 sec Start 49: eccodes_t_grib_g1monthlydate 49/59 Test #49: eccodes_t_grib_g1monthlydate ..............***Failed 0.01 sec Start 50: eccodes_t_grib_g1day_of_the_year_date 50/59 Test #50: eccodes_t_grib_g1day_of_the_year_date .....***Failed 0.01 sec Start 51: eccodes_t_grib_g1fcperiod 51/59 Test #51: eccodes_t_grib_g1fcperiod .................***Failed 0.01 sec Start 52: eccodes_c_grib_set_data 52/59 Test #52: eccodes_c_grib_set_data ...................***Failed 0.01 sec Start 53: eccodes_c_large_grib1 53/59 Test #53: eccodes_c_large_grib1 .....................***Failed 0.01 sec Start 54: eccodes_c_grib_sections_copy 54/59 Test #54: eccodes_c_grib_sections_copy ..............***Failed 0.01 sec Start 55: eccodes_c_get_product_kind_samples 55/59 Test #55: eccodes_c_get_product_kind_samples ........***Failed 0.01 sec Start 56: eccodes_c_new_sample Could not find executable /home/mohapatra/ROPP_dir/eccodes-2.23.0-Source/tmpbuild/examples/C/eccodes_c_new_sample Looked in the following places: /home/mohapatra/ROPP_dir/eccodes-2.23.0-Source/tmpbuild/examples/C/eccodes_c_new_sample /home/mohapatra/ROPP_dir/eccodes-2.23.0-Source/tmpbuild/examples/C/eccodes_c_new_sample /home/mohapatra/ROPP_dir/eccodes-2.23.0-Source/tmpbuild/examples/C/Release/eccodes_c_new_sample /home/mohapatra/ROPP_dir/eccodes-2.23.0-Source/tmpbuild/examples/C/Release/eccodes_c_new_sample /home/mohapatra/ROPP_dir/eccodes-2.23.0-Source/tmpbuild/examples/C/Debug/eccodes_c_new_sample /home/mohapatra/ROPP_dir/eccodes-2.23.0-Source/tmpbuild/examples/C/Debug/eccodes_c_new_sample /home/mohapatra/ROPP_dir/eccodes-2.23.0-Source/tmpbuild/examples/C/MinSizeRel/eccodes_c_new_sample /home/mohapatra/ROPP_dir/eccodes-2.23.0-Source/tmpbuild/examples/C/MinSizeRel/eccodes_c_new_sample /home/mohapatra/ROPP_dir/eccodes-2.23.0-Source/tmpbuild/examples/C/RelWithDebInfo/eccodes_c_new_sample /home/mohapatra/ROPP_dir/eccodes-2.23.0-Source/tmpbuild/examples/C/RelWithDebInfo/eccodes_c_new_sample /home/mohapatra/ROPP_dir/eccodes-2.23.0-Source/tmpbuild/examples/C/Deployment/eccodes_c_new_sample /home/mohapatra/ROPP_dir/eccodes-2.23.0-Source/tmpbuild/examples/C/Deployment/eccodes_c_new_sample /home/mohapatra/ROPP_dir/eccodes-2.23.0-Source/tmpbuild/examples/C/Development/eccodes_c_new_sample /home/mohapatra/ROPP_dir/eccodes-2.23.0-Source/tmpbuild/examples/C/Development/eccodes_c_new_sample home/mohapatra/ROPP_dir/eccodes-2.23.0-Source/tmpbuild/examples/C/eccodes_c_new_sample home/mohapatra/ROPP_dir/eccodes-2.23.0-Source/tmpbuild/examples/C/eccodes_c_new_sample home/mohapatra/ROPP_dir/eccodes-2.23.0-Source/tmpbuild/examples/C/Release/eccodes_c_new_sample home/mohapatra/ROPP_dir/eccodes-2.23.0-Source/tmpbuild/examples/C/Release/eccodes_c_new_sample home/mohapatra/ROPP_dir/eccodes-2.23.0-Source/tmpbuild/examples/C/Debug/eccodes_c_new_sample home/mohapatra/ROPP_dir/eccodes-2.23.0-Source/tmpbuild/examples/C/Debug/eccodes_c_new_sample home/mohapatra/ROPP_dir/eccodes-2.23.0-Source/tmpbuild/examples/C/MinSizeRel/eccodes_c_new_sample home/mohapatra/ROPP_dir/eccodes-2.23.0-Source/tmpbuild/examples/C/MinSizeRel/eccodes_c_new_sample home/mohapatra/ROPP_dir/eccodes-2.23.0-Source/tmpbuild/examples/C/RelWithDebInfo/eccodes_c_new_sample home/mohapatra/ROPP_dir/eccodes-2.23.0-Source/tmpbuild/examples/C/RelWithDebInfo/eccodes_c_new_sample home/mohapatra/ROPP_dir/eccodes-2.23.0-Source/tmpbuild/examples/C/Deployment/eccodes_c_new_sample home/mohapatra/ROPP_dir/eccodes-2.23.0-Source/tmpbuild/examples/C/Deployment/eccodes_c_new_sample home/mohapatra/ROPP_dir/eccodes-2.23.0-Source/tmpbuild/examples/C/Development/eccodes_c_new_sample home/mohapatra/ROPP_dir/eccodes-2.23.0-Source/tmpbuild/examples/C/Development/eccodes_c_new_sample Unable to find executable: /home/mohapatra/ROPP_dir/eccodes-2.23.0-Source/tmpbuild/examples/C/eccodes_c_new_sample 56/59 Test #56: eccodes_c_new_sample ......................***Not Run 0.00 sec Start 57: eccodes_f_grib_set_pv 57/59 Test #57: eccodes_f_grib_set_pv .....................***Failed 0.01 sec Start 58: eccodes_f_grib_set_data 58/59 Test #58: eccodes_f_grib_set_data ...................***Failed 0.01 sec Start 59: eccodes_f_grib_ecc-671 59/59 Test #59: eccodes_f_grib_ecc-671 ....................***Failed 0.01 sec 3% tests passed, 57 tests failed out of 59 Label Time Summary: eccodes = 0.75 sec*proc (59 tests) executable = 0.00 sec*proc (1 test) sanity = 0.75 sec*proc (58 tests) script = 0.75 sec*proc (58 tests) Total Test time (real) = 0.80 sec The following tests FAILED: 1 - eccodes_t_unit_tests (Failed) 2 - eccodes_t_julian (Failed) 3 - eccodes_t_grib_dump_samples (Failed) 4 - eccodes_t_bufr_dump_samples (Failed) 5 - eccodes_t_bufr_check_descriptors (Failed) 6 - eccodes_t_definitions (Failed) 7 - eccodes_t_grib2_version (Failed) 8 - eccodes_t_grib_calendar (Failed) 9 - eccodes_t_grib_md5 (Failed) 10 - eccodes_t_grib_cfNames (Failed) 11 - eccodes_t_grib_packing_order (Failed) 12 - eccodes_t_filter_substr (Failed) 13 - eccodes_t_grib_uerra (Failed) 14 - eccodes_t_grib_element (Failed) 15 - eccodes_t_grib_2nd_order_numValues (Failed) 16 - eccodes_t_grib_ecc-136 (Failed) 17 - eccodes_t_grib_ecc-922 (Failed) 18 - eccodes_t_grib_ecc-966 (Failed) 19 - eccodes_t_grib_ecc-967 (Failed) 20 - eccodes_t_grib_ecc-1150 (Failed) 21 - eccodes_t_grib_ecc-1053 (Failed) 22 - eccodes_t_grib_ecc-1065 (Failed) 23 - eccodes_t_grib_ecc-1167 (Failed) 24 - eccodes_t_grib_ecc-1170 (Failed) 25 - eccodes_t_grib_ecc-1195 (Failed) 26 - eccodes_t_grib_ecc-1212 (Failed) 27 - eccodes_t_grib_ecc-1230 (Failed) 28 - eccodes_t_grib_ecc-1255 (Failed) 29 - eccodes_t_grib_ecc-1258 (Failed) 30 - eccodes_t_grib_ecc-1260 (Failed) 31 - eccodes_t_grib_ecc-1271 (Failed) 33 - eccodes_t_bufr_ecc-1195 (Failed) 34 - eccodes_t_bufr_ecc-1259 (Failed) 35 - eccodes_t_bufr_json_samples (Failed) 37 - eccodes_t_bufr_ecc-517 (Failed) 38 - eccodes_t_bufr_rdbSubTypes (Failed) 39 - eccodes_t_bufr_templates (Failed) 40 - eccodes_t_grib_efas (Failed) 41 - eccodes_t_grib_sh_imag (Failed) 42 - eccodes_t_grib_sh_spectral_complex (Failed) 43 - eccodes_t_pseudo_diag (Failed) 44 - eccodes_t_wrap (Failed) 45 - eccodes_t_grib_levtype (Failed) 46 - eccodes_t_grib_grid_unstructured (Failed) 47 - eccodes_t_grib_grid_lambert_conformal (Failed) 48 - eccodes_t_grib_grid_polar_stereographic (Failed) 49 - eccodes_t_grib_g1monthlydate (Failed) 50 - eccodes_t_grib_g1day_of_the_year_date (Failed) 51 - eccodes_t_grib_g1fcperiod (Failed) 52 - eccodes_c_grib_set_data (Failed) 53 - eccodes_c_large_grib1 (Failed) 54 - eccodes_c_grib_sections_copy (Failed) 55 - eccodes_c_get_product_kind_samples (Failed) 56 - eccodes_c_new_sample (Not Run) 57 - eccodes_f_grib_set_pv (Failed) 58 - eccodes_f_grib_set_data (Failed) 59 - eccodes_f_grib_ecc-671 (Failed) Errors while running CTest [ 0%] Built target eccodes.pc-pkg-config [ 0%] Built target eccodes_f90.pc-pkg-config [ 60%] Built target eccodes [ 60%] Built target grib_tools [ 61%] Built target codes_bufr_filter [ 61%] Linking C executable ../bin/grib_to_netcdf /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-hdf5file.o): in function `dumpopenobjects': hdf5file.c:(.text+0x24): undefined reference to `H5Fget_obj_count' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-hdf5file.o): in function `sync_netcdf4_file': hdf5file.c:(.text+0x259): undefined reference to `H5Fflush' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-hdf5file.o): in function `nc4_close_netcdf4_file': hdf5file.c:(.text+0x391): undefined reference to `H5Fclose' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-hdf5grp.o): in function `NC4_rename_grp': hdf5grp.c:(.text+0x211): undefined reference to `H5Gclose' /usr/bin/ld: hdf5grp.c:(.text+0x303): undefined reference to `H5Lmove' /usr/bin/ld: hdf5grp.c:(.text+0x315): undefined reference to `H5Gopen2' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-hdf5internal.o): in function `nc4_hdf5_initialize': hdf5internal.c:(.text+0xb): undefined reference to `H5Eset_auto2' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-hdf5internal.o): in function `nc4_rec_find_hdf_type': hdf5internal.c:(.text+0x9e): undefined reference to `H5Tequal' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-hdf5internal.o): in function `nc4_find_dim_len': hdf5internal.c:(.text+0x226): undefined reference to `H5Dget_space' /usr/bin/ld: hdf5internal.c:(.text+0x238): undefined reference to `H5Sget_simple_extent_type' /usr/bin/ld: hdf5internal.c:(.text+0x26a): undefined reference to `H5Sclose' /usr/bin/ld: hdf5internal.c:(.text+0x2c1): undefined reference to `H5Sget_simple_extent_ndims' /usr/bin/ld: hdf5internal.c:(.text+0x34e): undefined reference to `H5Sget_simple_extent_dims' /usr/bin/ld: hdf5internal.c:(.text+0x3b6): undefined reference to `H5Sclose' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-hdf5internal.o): in function `delete_dimscale_dataset': hdf5internal.c:(.text+0x5c3): undefined reference to `H5Dclose' /usr/bin/ld: hdf5internal.c:(.text+0x5db): undefined reference to `H5Gunlink' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-hdf5internal.o): in function `nc4_reform_coord_var': hdf5internal.c:(.text+0x88c): undefined reference to `H5DSdetach_scale' /usr/bin/ld: hdf5internal.c:(.text+0x912): undefined reference to `H5Dclose' /usr/bin/ld: hdf5internal.c:(.text+0x93c): undefined reference to `H5Gunlink' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-hdf5internal.o): in function `nc4_rec_grp_HDF5_del': hdf5internal.c:(.text+0xa62): undefined reference to `H5Tclose' /usr/bin/ld: hdf5internal.c:(.text+0xb4d): undefined reference to `H5Tclose' /usr/bin/ld: hdf5internal.c:(.text+0xbf2): undefined reference to `H5Dclose' /usr/bin/ld: hdf5internal.c:(.text+0xca1): undefined reference to `H5Tclose' /usr/bin/ld: hdf5internal.c:(.text+0xcb1): undefined reference to `H5Tclose' /usr/bin/ld: hdf5internal.c:(.text+0xcc1): undefined reference to `H5Dclose' /usr/bin/ld: hdf5internal.c:(.text+0xd19): undefined reference to `H5Gclose' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-hdf5open.o): in function `rec_read_metadata': hdf5open.c:(.text+0x61): undefined reference to `H5Gopen2' /usr/bin/ld: hdf5open.c:(.text+0x7f): undefined reference to `H5Gget_create_plist' /usr/bin/ld: hdf5open.c:(.text+0x98): undefined reference to `H5Pget_link_creation_order' /usr/bin/ld: hdf5open.c:(.text+0xec): undefined reference to `H5Literate' /usr/bin/ld: hdf5open.c:(.text+0x1cf): undefined reference to `H5Pclose' /usr/bin/ld: hdf5open.c:(.text+0x219): undefined reference to `H5Oclose' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-hdf5open.o): in function `dimscale_visitor': hdf5open.c:(.text+0x2d9): undefined reference to `H5Gget_objinfo' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-hdf5open.o): in function `read_coord_dimids': hdf5open.c:(.text+0x37d): undefined reference to `H5Aexists' /usr/bin/ld: hdf5open.c:(.text+0x39e): undefined reference to `H5Aopen_name' /usr/bin/ld: hdf5open.c:(.text+0x3ae): undefined reference to `H5Aget_type' /usr/bin/ld: hdf5open.c:(.text+0x3be): undefined reference to `H5Aget_space' /usr/bin/ld: hdf5open.c:(.text+0x3ce): undefined reference to `H5Sget_simple_extent_npoints' /usr/bin/ld: hdf5open.c:(.text+0x3e6): undefined reference to `H5Sclose' /usr/bin/ld: hdf5open.c:(.text+0x3f8): undefined reference to `H5Tclose' /usr/bin/ld: hdf5open.c:(.text+0x40a): undefined reference to `H5Aclose' /usr/bin/ld: hdf5open.c:(.text+0x42b): undefined reference to `H5Aread' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-hdf5open.o): in function `get_netcdf_type': hdf5open.c:(.text+0x4c9): undefined reference to `H5Tget_class' /usr/bin/ld: hdf5open.c:(.text+0x511): undefined reference to `H5open' /usr/bin/ld: hdf5open.c:(.text+0x518): undefined reference to `H5T_NATIVE_SCHAR_g' /usr/bin/ld: hdf5open.c:(.text+0x520): undefined reference to `H5Tequal' /usr/bin/ld: hdf5open.c:(.text+0x554): undefined reference to `H5Tis_variable_str' /usr/bin/ld: hdf5open.c:(.text+0x571): undefined reference to `H5open' /usr/bin/ld: hdf5open.c:(.text+0x578): undefined reference to `H5T_NATIVE_SHORT_g' /usr/bin/ld: hdf5open.c:(.text+0x580): undefined reference to `H5Tequal' /usr/bin/ld: hdf5open.c:(.text+0x5b1): undefined reference to `H5open' /usr/bin/ld: hdf5open.c:(.text+0x5b8): undefined reference to `H5T_NATIVE_INT_g' /usr/bin/ld: hdf5open.c:(.text+0x5c0): undefined reference to `H5Tequal' /usr/bin/ld: hdf5open.c:(.text+0x5e1): undefined reference to `H5open' /usr/bin/ld: hdf5open.c:(.text+0x5e8): undefined reference to `H5T_NATIVE_FLOAT_g' /usr/bin/ld: hdf5open.c:(.text+0x5f0): undefined reference to `H5Tequal' /usr/bin/ld: hdf5open.c:(.text+0x621): undefined reference to `H5open' /usr/bin/ld: hdf5open.c:(.text+0x628): undefined reference to `H5T_NATIVE_DOUBLE_g' /usr/bin/ld: hdf5open.c:(.text+0x630): undefined reference to `H5Tequal' /usr/bin/ld: hdf5open.c:(.text+0x64c): undefined reference to `H5open' /usr/bin/ld: hdf5open.c:(.text+0x653): undefined reference to `H5T_NATIVE_UCHAR_g' /usr/bin/ld: hdf5open.c:(.text+0x65b): undefined reference to `H5Tequal' /usr/bin/ld: hdf5open.c:(.text+0x685): undefined reference to `H5open' /usr/bin/ld: hdf5open.c:(.text+0x68c): undefined reference to `H5T_NATIVE_USHORT_g' /usr/bin/ld: hdf5open.c:(.text+0x694): undefined reference to `H5Tequal' /usr/bin/ld: hdf5open.c:(.text+0x6b4): undefined reference to `H5open' /usr/bin/ld: hdf5open.c:(.text+0x6bb): undefined reference to `H5T_NATIVE_UINT_g' /usr/bin/ld: hdf5open.c:(.text+0x6c3): undefined reference to `H5Tequal' /usr/bin/ld: hdf5open.c:(.text+0x6df): undefined reference to `H5open' /usr/bin/ld: hdf5open.c:(.text+0x6e6): undefined reference to `H5T_NATIVE_LLONG_g' /usr/bin/ld: hdf5open.c:(.text+0x6ee): undefined reference to `H5Tequal' /usr/bin/ld: hdf5open.c:(.text+0x70e): undefined reference to `H5open' /usr/bin/ld: hdf5open.c:(.text+0x715): undefined reference to `H5T_NATIVE_ULLONG_g' /usr/bin/ld: hdf5open.c:(.text+0x71d): undefined reference to `H5Tequal' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-hdf5open.o): in function `read_type': hdf5open.c:(.text+0x789): undefined reference to `H5Tget_native_type' /usr/bin/ld: hdf5open.c:(.text+0x79d): undefined reference to `H5Tget_size' /usr/bin/ld: hdf5open.c:(.text+0x813): undefined reference to `H5Iinc_ref' /usr/bin/ld: hdf5open.c:(.text+0x81f): undefined reference to `H5Tget_class' /usr/bin/ld: hdf5open.c:(.text+0x844): undefined reference to `H5Tis_variable_str' /usr/bin/ld: hdf5open.c:(.text+0x883): undefined reference to `H5Tget_super' /usr/bin/ld: hdf5open.c:(.text+0x8b0): undefined reference to `H5Tget_nmembers' /usr/bin/ld: hdf5open.c:(.text+0x937): undefined reference to `H5free_memory' /usr/bin/ld: hdf5open.c:(.text+0x94d): undefined reference to `H5Tget_member_type' /usr/bin/ld: hdf5open.c:(.text+0x963): undefined reference to `H5Tget_native_type' /usr/bin/ld: hdf5open.c:(.text+0x97c): undefined reference to `H5Tget_member_name' /usr/bin/ld: hdf5open.c:(.text+0x9a7): undefined reference to `H5Tget_member_offset' /usr/bin/ld: hdf5open.c:(.text+0x9b4): undefined reference to `H5Tget_class' /usr/bin/ld: hdf5open.c:(.text+0x9cd): undefined reference to `H5Tget_array_ndims' /usr/bin/ld: hdf5open.c:(.text+0x9eb): undefined reference to `H5Tget_array_dims1' /usr/bin/ld: hdf5open.c:(.text+0xa31): undefined reference to `H5Tget_super' /usr/bin/ld: hdf5open.c:(.text+0xaa4): undefined reference to `H5Tget_size' /usr/bin/ld: hdf5open.c:(.text+0xae6): undefined reference to `H5Tget_nmembers' /usr/bin/ld: hdf5open.c:(.text+0xb5d): undefined reference to `H5Tget_member_value' /usr/bin/ld: hdf5open.c:(.text+0xb8c): undefined reference to `H5free_memory' /usr/bin/ld: hdf5open.c:(.text+0xb9f): undefined reference to `H5Tget_member_name' /usr/bin/ld: hdf5open.c:(.text+0xbc6): undefined reference to `H5Tget_super' /usr/bin/ld: hdf5open.c:(.text+0xbda): undefined reference to `H5Tget_size' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-hdf5open.o): in function `create_phony_dims': hdf5open.c:(.text+0xc8f): undefined reference to `H5Dget_space' /usr/bin/ld: hdf5open.c:(.text+0xcb4): undefined reference to `H5Sget_simple_extent_type' /usr/bin/ld: hdf5open.c:(.text+0xe10): undefined reference to `H5Sget_simple_extent_dims' /usr/bin/ld: hdf5open.c:(.text+0xf06): undefined reference to `H5Sclose' /usr/bin/ld: hdf5open.c:(.text+0xfa4): undefined reference to `H5Sclose' /usr/bin/ld: hdf5open.c:(.text+0xfc9): undefined reference to `H5Sclose' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-hdf5open.o): in function `get_chunking_info': hdf5open.c:(.text+0x1357): undefined reference to `H5Pget_layout' /usr/bin/ld: hdf5open.c:(.text+0x139c): undefined reference to `H5Pget_chunk' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-hdf5open.o): in function `get_attached_info.isra.1': hdf5open.c:(.text+0x141d): undefined reference to `H5DSget_num_scales' /usr/bin/ld: hdf5open.c:(.text+0x14b8): undefined reference to `H5DSiterate_scales' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-hdf5open.o): in function `read_hdf5_obj': hdf5open.c:(.text+0x150a): undefined reference to `H5Oopen' /usr/bin/ld: hdf5open.c:(.text+0x153c): undefined reference to `H5Gget_objinfo' /usr/bin/ld: hdf5open.c:(.text+0x1588): undefined reference to `H5Oclose' /usr/bin/ld: hdf5open.c:(.text+0x15c0): undefined reference to `H5Dget_space' /usr/bin/ld: hdf5open.c:(.text+0x15d4): undefined reference to `H5Sget_simple_extent_ndims' /usr/bin/ld: hdf5open.c:(.text+0x15e7): undefined reference to `H5DSis_scale' /usr/bin/ld: hdf5open.c:(.text+0x16da): undefined reference to `H5Iinc_ref' /usr/bin/ld: hdf5open.c:(.text+0x1731): undefined reference to `H5Idec_ref' /usr/bin/ld: hdf5open.c:(.text+0x1780): undefined reference to `H5Oclose' /usr/bin/ld: hdf5open.c:(.text+0x1811): undefined reference to `H5Sget_simple_extent_dims' /usr/bin/ld: hdf5open.c:(.text+0x186c): undefined reference to `H5Aexists' /usr/bin/ld: hdf5open.c:(.text+0x1887): undefined reference to `H5Aopen_name' /usr/bin/ld: hdf5open.c:(.text+0x189a): undefined reference to `H5open' /usr/bin/ld: hdf5open.c:(.text+0x18ab): undefined reference to `H5T_NATIVE_INT_g' /usr/bin/ld: hdf5open.c:(.text+0x18b3): undefined reference to `H5Aread' /usr/bin/ld: hdf5open.c:(.text+0x1910): undefined reference to `H5Aclose' /usr/bin/ld: hdf5open.c:(.text+0x192d): undefined reference to `H5Sclose' /usr/bin/ld: hdf5open.c:(.text+0x19fe): undefined reference to `H5Sclose' /usr/bin/ld: hdf5open.c:(.text+0x1ad7): undefined reference to `H5Dget_type' /usr/bin/ld: hdf5open.c:(.text+0x1aef): undefined reference to `H5Tget_native_type' /usr/bin/ld: hdf5open.c:(.text+0x1b05): undefined reference to `H5Tget_class' /usr/bin/ld: hdf5open.c:(.text+0x1b5b): undefined reference to `H5Tclose' /usr/bin/ld: hdf5open.c:(.text+0x1b6d): undefined reference to `H5Tclose' /usr/bin/ld: hdf5open.c:(.text+0x1bb2): undefined reference to `H5Oclose' /usr/bin/ld: hdf5open.c:(.text+0x1bd1): undefined reference to `H5Sclose' /usr/bin/ld: hdf5open.c:(.text+0x1c8d): undefined reference to `H5DSget_scale_name' /usr/bin/ld: hdf5open.c:(.text+0x1d10): undefined reference to `H5Iinc_ref' /usr/bin/ld: hdf5open.c:(.text+0x1d2c): undefined reference to `H5Aclose' /usr/bin/ld: hdf5open.c:(.text+0x1d61): undefined reference to `H5Aclose' /usr/bin/ld: hdf5open.c:(.text+0x1e22): undefined reference to `H5Tequal' /usr/bin/ld: hdf5open.c:(.text+0x1e48): undefined reference to `H5Tget_order' /usr/bin/ld: hdf5open.c:(.text+0x1f69): undefined reference to `H5open' /usr/bin/ld: hdf5open.c:(.text+0x1f70): undefined reference to `H5T_NATIVE_SCHAR_g' /usr/bin/ld: hdf5open.c:(.text+0x1f7c): undefined reference to `H5open' /usr/bin/ld: hdf5open.c:(.text+0x1f83): undefined reference to `H5T_NATIVE_SHORT_g' /usr/bin/ld: hdf5open.c:(.text+0x1f8f): undefined reference to `H5open' /usr/bin/ld: hdf5open.c:(.text+0x1f96): undefined reference to `H5T_NATIVE_INT_g' /usr/bin/ld: hdf5open.c:(.text+0x1fa2): undefined reference to `H5open' /usr/bin/ld: hdf5open.c:(.text+0x1fa9): undefined reference to `H5T_NATIVE_FLOAT_g' /usr/bin/ld: hdf5open.c:(.text+0x1fb5): undefined reference to `H5open' /usr/bin/ld: hdf5open.c:(.text+0x1fbc): undefined reference to `H5T_NATIVE_DOUBLE_g' /usr/bin/ld: hdf5open.c:(.text+0x1fc8): undefined reference to `H5open' /usr/bin/ld: hdf5open.c:(.text+0x1fcf): undefined reference to `H5T_NATIVE_UCHAR_g' /usr/bin/ld: hdf5open.c:(.text+0x1fdb): undefined reference to `H5open' /usr/bin/ld: hdf5open.c:(.text+0x1fe2): undefined reference to `H5T_NATIVE_USHORT_g' /usr/bin/ld: hdf5open.c:(.text+0x1fee): undefined reference to `H5open' /usr/bin/ld: hdf5open.c:(.text+0x1ff5): undefined reference to `H5T_NATIVE_UINT_g' /usr/bin/ld: hdf5open.c:(.text+0x2001): undefined reference to `H5open' /usr/bin/ld: hdf5open.c:(.text+0x2008): undefined reference to `H5T_NATIVE_LLONG_g' /usr/bin/ld: hdf5open.c:(.text+0x2014): undefined reference to `H5open' /usr/bin/ld: hdf5open.c:(.text+0x201b): undefined reference to `H5T_NATIVE_ULLONG_g' /usr/bin/ld: hdf5open.c:(.text+0x204a): undefined reference to `H5Tis_variable_str' /usr/bin/ld: hdf5open.c:(.text+0x2080): undefined reference to `H5Tget_size' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-hdf5open.o): in function `att_read_callbk': hdf5open.c:(.text+0x2260): undefined reference to `H5Aopen' /usr/bin/ld: hdf5open.c:(.text+0x22ab): undefined reference to `H5Aget_type' /usr/bin/ld: hdf5open.c:(.text+0x22c5): undefined reference to `H5Tget_native_type' /usr/bin/ld: hdf5open.c:(.text+0x22d9): undefined reference to `H5Tget_class' /usr/bin/ld: hdf5open.c:(.text+0x2321): undefined reference to `H5Aget_space' /usr/bin/ld: hdf5open.c:(.text+0x2337): undefined reference to `H5Sget_simple_extent_ndims' /usr/bin/ld: hdf5open.c:(.text+0x234d): undefined reference to `H5Sget_simple_extent_npoints' /usr/bin/ld: hdf5open.c:(.text+0x2386): undefined reference to `H5Tclose' /usr/bin/ld: hdf5open.c:(.text+0x2398): undefined reference to `H5Sclose' /usr/bin/ld: hdf5open.c:(.text+0x23ba): undefined reference to `H5Aclose' /usr/bin/ld: hdf5open.c:(.text+0x2416): undefined reference to `H5Tclose' /usr/bin/ld: hdf5open.c:(.text+0x2428): undefined reference to `H5Tclose' /usr/bin/ld: hdf5open.c:(.text+0x245e): undefined reference to `H5Tclose' /usr/bin/ld: hdf5open.c:(.text+0x2477): undefined reference to `H5Tget_size' /usr/bin/ld: hdf5open.c:(.text+0x2495): undefined reference to `H5Tclose' /usr/bin/ld: hdf5open.c:(.text+0x24b3): undefined reference to `H5Sclose' /usr/bin/ld: hdf5open.c:(.text+0x24c0): undefined reference to `H5Tis_variable_str' /usr/bin/ld: hdf5open.c:(.text+0x24d4): undefined reference to `H5Tget_size' /usr/bin/ld: hdf5open.c:(.text+0x2518): undefined reference to `H5Sget_simple_extent_type' /usr/bin/ld: hdf5open.c:(.text+0x25a4): undefined reference to `H5Aread' /usr/bin/ld: hdf5open.c:(.text+0x25cf): undefined reference to `H5Sclose' /usr/bin/ld: hdf5open.c:(.text+0x2665): undefined reference to `H5Aread' /usr/bin/ld: hdf5open.c:(.text+0x2705): undefined reference to `H5Sget_simple_extent_dims' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-hdf5open.o): in function `NC4_open': hdf5open.c:(.text+0x27c8): undefined reference to `H5check_version' /usr/bin/ld: hdf5open.c:(.text+0x27cd): undefined reference to `H5open' /usr/bin/ld: hdf5open.c:(.text+0x289d): undefined reference to `H5open' /usr/bin/ld: hdf5open.c:(.text+0x28a4): undefined reference to `H5P_CLS_FILE_ACCESS_ID_g' /usr/bin/ld: hdf5open.c:(.text+0x28a9): undefined reference to `H5Pcreate' /usr/bin/ld: hdf5open.c:(.text+0x28c2): undefined reference to `H5Pset_fclose_degree' /usr/bin/ld: hdf5open.c:(.text+0x28ee): undefined reference to `H5Pset_cache' /usr/bin/ld: hdf5open.c:(.text+0x29ae): undefined reference to `H5Aexists' /usr/bin/ld: hdf5open.c:(.text+0x29ef): undefined reference to `H5Pclose' /usr/bin/ld: hdf5open.c:(.text+0x2a11): undefined reference to `H5check_version' /usr/bin/ld: hdf5open.c:(.text+0x2a16): undefined reference to `H5open' /usr/bin/ld: hdf5open.c:(.text+0x2a8a): undefined reference to `H5Pset_fapl_core' /usr/bin/ld: hdf5open.c:(.text+0x2a9d): undefined reference to `H5Fopen' /usr/bin/ld: hdf5open.c:(.text+0x2abf): undefined reference to `H5Pclose' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-hdf5open.o): in function `nc4_get_var_meta': hdf5open.c:(.text+0x2bb5): undefined reference to `H5Dget_access_plist' /usr/bin/ld: hdf5open.c:(.text+0x2bdc): undefined reference to `H5Pget_chunk_cache' /usr/bin/ld: hdf5open.c:(.text+0x2bfb): undefined reference to `H5Dget_create_plist' /usr/bin/ld: hdf5open.c:(.text+0x2c37): undefined reference to `H5Pclose' /usr/bin/ld: hdf5open.c:(.text+0x2c6a): undefined reference to `H5Pclose' /usr/bin/ld: hdf5open.c:(.text+0x2ccf): undefined reference to `H5Pget_filter2' /usr/bin/ld: hdf5open.c:(.text+0x2cfd): undefined reference to `H5Pget_nfilters' /usr/bin/ld: hdf5open.c:(.text+0x2d6b): undefined reference to `H5Pget_filter2' /usr/bin/ld: hdf5open.c:(.text+0x2e14): undefined reference to `H5Pget_filter2' /usr/bin/ld: hdf5open.c:(.text+0x2e3f): undefined reference to `H5Pfill_value_defined' /usr/bin/ld: hdf5open.c:(.text+0x2eac): undefined reference to `H5Pget_fill_value' /usr/bin/ld: hdf5open.c:(.text+0x2f65): undefined reference to `H5Pclose' /usr/bin/ld: hdf5open.c:(.text+0x2f7d): undefined reference to `H5Pclose' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-hdf5open.o): in function `nc4_read_atts': hdf5open.c:(.text+0x2fd0): undefined reference to `H5Aiterate2' /usr/bin/ld: hdf5open.c:(.text+0x300a): undefined reference to `H5Aiterate2' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-hdf5type.o): in function `NC4_inq_type_equal': hdf5type.c:(.text+0x2ce): undefined reference to `H5Tequal' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-hdf5var.o): in function `nc4_reopen_dataset': hdf5var.c:(.text+0xd04): undefined reference to `H5open' /usr/bin/ld: hdf5var.c:(.text+0xd0b): undefined reference to `H5P_CLS_DATASET_ACCESS_ID_g' /usr/bin/ld: hdf5var.c:(.text+0xd10): undefined reference to `H5Pcreate' /usr/bin/ld: hdf5var.c:(.text+0xd3a): undefined reference to `H5Pset_chunk_cache' /usr/bin/ld: hdf5var.c:(.text+0xd47): undefined reference to `H5Dclose' /usr/bin/ld: hdf5var.c:(.text+0xd5a): undefined reference to `H5Dopen2' /usr/bin/ld: hdf5var.c:(.text+0xd6b): undefined reference to `H5Pclose' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-hdf5var.o): in function `NC4_def_var': hdf5var.c:(.text+0x1027): undefined reference to `H5Tget_native_type' /usr/bin/ld: hdf5var.c:(.text+0x121d): undefined reference to `H5Dclose' /usr/bin/ld: hdf5var.c:(.text+0x1247): undefined reference to `H5Gunlink' /usr/bin/ld: hdf5var.c:(.text+0x13af): undefined reference to `H5Tget_class' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-hdf5var.o): in function `NC4_rename_var': hdf5var.c:(.text+0x196c): undefined reference to `H5Lmove' /usr/bin/ld: hdf5var.c:(.text+0x19dd): undefined reference to `H5Lmove' /usr/bin/ld: hdf5var.c:(.text+0x1a01): undefined reference to `H5Lmove' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-hdf5var.o): in function `NC4_put_vars': hdf5var.c:(.text+0x1df3): undefined reference to `H5Dget_space' /usr/bin/ld: hdf5var.c:(.text+0x1e17): undefined reference to `H5Sget_simple_extent_dims' /usr/bin/ld: hdf5var.c:(.text+0x1ef4): undefined reference to `H5Sget_simple_extent_type' /usr/bin/ld: hdf5var.c:(.text+0x1f29): undefined reference to `H5Sselect_hyperslab' /usr/bin/ld: hdf5var.c:(.text+0x1f49): undefined reference to `H5Screate_simple' /usr/bin/ld: hdf5var.c:(.text+0x1fc1): undefined reference to `H5open' /usr/bin/ld: hdf5var.c:(.text+0x1fc8): undefined reference to `H5P_CLS_DATASET_XFER_ID_g' /usr/bin/ld: hdf5var.c:(.text+0x1fcd): undefined reference to `H5Pcreate' /usr/bin/ld: hdf5var.c:(.text+0x206f): undefined reference to `H5Dwrite' /usr/bin/ld: hdf5var.c:(.text+0x20c2): undefined reference to `H5Sclose' /usr/bin/ld: hdf5var.c:(.text+0x20dc): undefined reference to `H5Sclose' /usr/bin/ld: hdf5var.c:(.text+0x20f9): undefined reference to `H5Pclose' /usr/bin/ld: hdf5var.c:(.text+0x216f): undefined reference to `H5Sclose' /usr/bin/ld: hdf5var.c:(.text+0x2183): undefined reference to `H5Screate' /usr/bin/ld: hdf5var.c:(.text+0x2361): undefined reference to `H5Dset_extent' /usr/bin/ld: hdf5var.c:(.text+0x2394): undefined reference to `H5Sclose' /usr/bin/ld: hdf5var.c:(.text+0x23c6): undefined reference to `H5Dget_space' /usr/bin/ld: hdf5var.c:(.text+0x23f1): undefined reference to `H5Sselect_hyperslab' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-hdf5var.o): in function `NC4_get_vars': hdf5var.c:(.text+0x270c): undefined reference to `H5Dget_space' /usr/bin/ld: hdf5var.c:(.text+0x2791): undefined reference to `H5Sget_simple_extent_dims' /usr/bin/ld: hdf5var.c:(.text+0x2931): undefined reference to `H5Sclose' /usr/bin/ld: hdf5var.c:(.text+0x2a68): undefined reference to `H5Sclose' /usr/bin/ld: hdf5var.c:(.text+0x2a7f): undefined reference to `H5Sclose' /usr/bin/ld: hdf5var.c:(.text+0x2a97): undefined reference to `H5Pclose' /usr/bin/ld: hdf5var.c:(.text+0x2ada): undefined reference to `H5Sget_simple_extent_type' /usr/bin/ld: hdf5var.c:(.text+0x2ae9): undefined reference to `H5Screate' /usr/bin/ld: hdf5var.c:(.text+0x2b4c): undefined reference to `H5open' /usr/bin/ld: hdf5var.c:(.text+0x2b53): undefined reference to `H5P_CLS_DATASET_XFER_ID_g' /usr/bin/ld: hdf5var.c:(.text+0x2b58): undefined reference to `H5Pcreate' /usr/bin/ld: hdf5var.c:(.text+0x2ba8): undefined reference to `H5Dread' /usr/bin/ld: hdf5var.c:(.text+0x2d2f): undefined reference to `H5Sselect_hyperslab' /usr/bin/ld: hdf5var.c:(.text+0x2d4f): undefined reference to `H5Screate_simple' /usr/bin/ld: hdf5var.c:(.text+0x2e56): undefined reference to `H5Tget_size' /usr/bin/ld: hdf5var.c:(.text+0x2f3b): undefined reference to `H5Tis_variable_str' /usr/bin/ld: hdf5var.c:(.text+0x2f53): undefined reference to `H5Tget_size' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-nc4hdf.o): in function `write_netcdf4_dimid': nc4hdf.c:(.text+0x42): undefined reference to `H5Screate' /usr/bin/ld: nc4hdf.c:(.text+0x5b): undefined reference to `H5Aexists' /usr/bin/ld: nc4hdf.c:(.text+0x7c): undefined reference to `H5Aopen_by_name' /usr/bin/ld: nc4hdf.c:(.text+0x8d): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0x94): undefined reference to `H5T_NATIVE_INT_g' /usr/bin/ld: nc4hdf.c:(.text+0xa1): undefined reference to `H5Awrite' /usr/bin/ld: nc4hdf.c:(.text+0xae): undefined reference to `H5Sclose' /usr/bin/ld: nc4hdf.c:(.text+0xc3): undefined reference to `H5Aclose' /usr/bin/ld: nc4hdf.c:(.text+0xe1): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0xf3): undefined reference to `H5T_NATIVE_INT_g' /usr/bin/ld: nc4hdf.c:(.text+0xfb): undefined reference to `H5Acreate1' /usr/bin/ld: nc4hdf.c:(.text+0x10f): undefined reference to `H5Sclose' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-nc4hdf.o): in function `NC4_walk': nc4hdf.c:(.text+0x13f): undefined reference to `H5Gget_num_objs' /usr/bin/ld: nc4hdf.c:(.text+0x170): undefined reference to `H5Gget_objname_by_idx' /usr/bin/ld: nc4hdf.c:(.text+0x186): undefined reference to `H5Gget_objtype_by_idx' /usr/bin/ld: nc4hdf.c:(.text+0x1c0): undefined reference to `H5Dopen1' /usr/bin/ld: nc4hdf.c:(.text+0x1cb): undefined reference to `H5Aget_num_attrs' /usr/bin/ld: nc4hdf.c:(.text+0x1e6): undefined reference to `H5Aopen_idx' /usr/bin/ld: nc4hdf.c:(.text+0x1fe): undefined reference to `H5Aget_name' /usr/bin/ld: nc4hdf.c:(.text+0x21f): undefined reference to `H5Aclose' /usr/bin/ld: nc4hdf.c:(.text+0x22d): undefined reference to `H5Dclose' /usr/bin/ld: nc4hdf.c:(.text+0x261): undefined reference to `H5Gopen1' /usr/bin/ld: nc4hdf.c:(.text+0x277): undefined reference to `H5Gclose' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-nc4hdf.o): in function `var_exists': nc4hdf.c:(.text+0x38a): undefined reference to `H5Lexists' /usr/bin/ld: nc4hdf.c:(.text+0x3af): undefined reference to `H5Gget_objinfo' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-nc4hdf.o): in function `rec_reattach_scales': nc4hdf.c:(.text+0x50f): undefined reference to `H5DSattach_scale' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-nc4hdf.o): in function `rec_detach_scales': nc4hdf.c:(.text+0x708): undefined reference to `H5DSdetach_scale' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-nc4hdf.o): in function `nc4_open_var_grp2': nc4hdf.c:(.text+0x814): undefined reference to `H5Dopen2' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-nc4hdf.o): in function `nc4_get_hdf_typeid': nc4hdf.c:(.text+0xab6): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0xabd): undefined reference to `H5T_C_S1_g' /usr/bin/ld: nc4hdf.c:(.text+0xac2): undefined reference to `H5Tcopy' /usr/bin/ld: nc4hdf.c:(.text+0xadd): undefined reference to `H5Tset_size' /usr/bin/ld: nc4hdf.c:(.text+0xaee): undefined reference to `H5Tset_cset' /usr/bin/ld: nc4hdf.c:(.text+0xb09): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0xb10): undefined reference to `H5T_C_S1_g' /usr/bin/ld: nc4hdf.c:(.text+0xb15): undefined reference to `H5Tcopy' /usr/bin/ld: nc4hdf.c:(.text+0xb27): undefined reference to `H5Tset_strpad' /usr/bin/ld: nc4hdf.c:(.text+0xb35): undefined reference to `H5Tset_cset' /usr/bin/ld: nc4hdf.c:(.text+0xb49): undefined reference to `H5Tclose' /usr/bin/ld: nc4hdf.c:(.text+0xb73): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0xb7a): undefined reference to `H5T_NATIVE_FLOAT_g' /usr/bin/ld: nc4hdf.c:(.text+0xb8a): undefined reference to `H5Tcopy' /usr/bin/ld: nc4hdf.c:(.text+0xbc3): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0xbca): undefined reference to `H5T_NATIVE_DOUBLE_g' /usr/bin/ld: nc4hdf.c:(.text+0xbe3): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0xbea): undefined reference to `H5T_NATIVE_UCHAR_g' /usr/bin/ld: nc4hdf.c:(.text+0xc03): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0xc0a): undefined reference to `H5T_NATIVE_USHORT_g' /usr/bin/ld: nc4hdf.c:(.text+0xc2b): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0xc32): undefined reference to `H5T_NATIVE_ULLONG_g' /usr/bin/ld: nc4hdf.c:(.text+0xc53): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0xc5a): undefined reference to `H5T_NATIVE_SCHAR_g' /usr/bin/ld: nc4hdf.c:(.text+0xc7b): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0xc82): undefined reference to `H5T_NATIVE_UINT_g' /usr/bin/ld: nc4hdf.c:(.text+0xca3): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0xcaa): undefined reference to `H5T_NATIVE_LLONG_g' /usr/bin/ld: nc4hdf.c:(.text+0xcc7): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0xcce): undefined reference to `H5T_NATIVE_SHORT_g' /usr/bin/ld: nc4hdf.c:(.text+0xcf3): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0xcfa): undefined reference to `H5T_NATIVE_INT_g' /usr/bin/ld: nc4hdf.c:(.text+0xd39): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0xd40): undefined reference to `H5T_STD_I16BE_g' /usr/bin/ld: nc4hdf.c:(.text+0xd51): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0xd58): undefined reference to `H5T_STD_U32BE_g' /usr/bin/ld: nc4hdf.c:(.text+0xd69): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0xd70): undefined reference to `H5T_STD_U64BE_g' /usr/bin/ld: nc4hdf.c:(.text+0xd81): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0xd88): undefined reference to `H5T_IEEE_F64BE_g' /usr/bin/ld: nc4hdf.c:(.text+0xd99): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0xda0): undefined reference to `H5T_STD_I8BE_g' /usr/bin/ld: nc4hdf.c:(.text+0xdb1): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0xdb8): undefined reference to `H5T_STD_U16BE_g' /usr/bin/ld: nc4hdf.c:(.text+0xdc9): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0xdd0): undefined reference to `H5T_STD_I64BE_g' /usr/bin/ld: nc4hdf.c:(.text+0xde1): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0xde8): undefined reference to `H5T_STD_U8BE_g' /usr/bin/ld: nc4hdf.c:(.text+0xdf9): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0xe00): undefined reference to `H5T_IEEE_F32BE_g' /usr/bin/ld: nc4hdf.c:(.text+0xe11): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0xe18): undefined reference to `H5T_STD_I32BE_g' /usr/bin/ld: nc4hdf.c:(.text+0xe33): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0xe3a): undefined reference to `H5T_STD_I32LE_g' /usr/bin/ld: nc4hdf.c:(.text+0xe44): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0xe4b): undefined reference to `H5T_STD_U8LE_g' /usr/bin/ld: nc4hdf.c:(.text+0xe55): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0xe5c): undefined reference to `H5T_IEEE_F32LE_g' /usr/bin/ld: nc4hdf.c:(.text+0xe66): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0xe6d): undefined reference to `H5T_STD_U16LE_g' /usr/bin/ld: nc4hdf.c:(.text+0xe77): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0xe7e): undefined reference to `H5T_STD_I64LE_g' /usr/bin/ld: nc4hdf.c:(.text+0xe88): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0xe8f): undefined reference to `H5T_IEEE_F64LE_g' /usr/bin/ld: nc4hdf.c:(.text+0xe99): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0xea0): undefined reference to `H5T_STD_I8LE_g' /usr/bin/ld: nc4hdf.c:(.text+0xeaa): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0xeb1): undefined reference to `H5T_STD_U32LE_g' /usr/bin/ld: nc4hdf.c:(.text+0xebb): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0xec2): undefined reference to `H5T_STD_U64LE_g' /usr/bin/ld: nc4hdf.c:(.text+0xecc): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0xed3): undefined reference to `H5T_STD_I16LE_g' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-nc4hdf.o): in function `write_attlist': nc4hdf.c:(.text+0x104d): undefined reference to `H5Screate' /usr/bin/ld: nc4hdf.c:(.text+0x106d): undefined reference to `H5Aexists' /usr/bin/ld: nc4hdf.c:(.text+0x108a): undefined reference to `H5Aopen' /usr/bin/ld: nc4hdf.c:(.text+0x10a3): undefined reference to `H5Aget_type' /usr/bin/ld: nc4hdf.c:(.text+0x10b9): undefined reference to `H5Aget_space' /usr/bin/ld: nc4hdf.c:(.text+0x10cd): undefined reference to `H5Sget_simple_extent_npoints' /usr/bin/ld: nc4hdf.c:(.text+0x10ea): undefined reference to `H5Tequal' /usr/bin/ld: nc4hdf.c:(.text+0x111c): undefined reference to `H5Adelete' /usr/bin/ld: nc4hdf.c:(.text+0x1140): undefined reference to `H5Acreate1' /usr/bin/ld: nc4hdf.c:(.text+0x1163): undefined reference to `H5Awrite' /usr/bin/ld: nc4hdf.c:(.text+0x11f3): undefined reference to `H5Tclose' /usr/bin/ld: nc4hdf.c:(.text+0x1210): undefined reference to `H5Aclose' /usr/bin/ld: nc4hdf.c:(.text+0x1226): undefined reference to `H5Sclose' /usr/bin/ld: nc4hdf.c:(.text+0x1237): undefined reference to `H5Sclose' /usr/bin/ld: nc4hdf.c:(.text+0x1269): undefined reference to `H5Sclose' /usr/bin/ld: nc4hdf.c:(.text+0x12bd): undefined reference to `H5Screate_simple' /usr/bin/ld: nc4hdf.c:(.text+0x12fb): undefined reference to `H5Acreate1' /usr/bin/ld: nc4hdf.c:(.text+0x1321): undefined reference to `H5Awrite' /usr/bin/ld: nc4hdf.c:(.text+0x135d): undefined reference to `H5Aclose' /usr/bin/ld: nc4hdf.c:(.text+0x137e): undefined reference to `H5Tclose' /usr/bin/ld: nc4hdf.c:(.text+0x13de): undefined reference to `H5Screate' /usr/bin/ld: nc4hdf.c:(.text+0x1409): undefined reference to `H5Tset_size' /usr/bin/ld: nc4hdf.c:(.text+0x141d): undefined reference to `H5Tset_strpad' /usr/bin/ld: nc4hdf.c:(.text+0x1433): undefined reference to `H5Screate' /usr/bin/ld: nc4hdf.c:(.text+0x14a3): undefined reference to `H5Tclose' /usr/bin/ld: nc4hdf.c:(.text+0x14cf): undefined reference to `H5Tclose' /usr/bin/ld: nc4hdf.c:(.text+0x1503): undefined reference to `H5Awrite' /usr/bin/ld: nc4hdf.c:(.text+0x156a): undefined reference to `H5Tclose' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-nc4hdf.o): in function `var_create_dataset': nc4hdf.c:(.text+0x15f7): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0x15fe): undefined reference to `H5P_CLS_DATASET_CREATE_ID_g' /usr/bin/ld: nc4hdf.c:(.text+0x1603): undefined reference to `H5Pcreate' /usr/bin/ld: nc4hdf.c:(.text+0x1614): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0x161b): undefined reference to `H5P_CLS_DATASET_ACCESS_ID_g' /usr/bin/ld: nc4hdf.c:(.text+0x1620): undefined reference to `H5Pcreate' /usr/bin/ld: nc4hdf.c:(.text+0x1638): undefined reference to `H5Pset_obj_track_times' /usr/bin/ld: nc4hdf.c:(.text+0x1681): undefined reference to `H5Pset_fill_time' /usr/bin/ld: nc4hdf.c:(.text+0x16e9): undefined reference to `H5Pset_chunk' /usr/bin/ld: nc4hdf.c:(.text+0x1713): undefined reference to `H5Tclose' /usr/bin/ld: nc4hdf.c:(.text+0x172a): undefined reference to `H5Pclose' /usr/bin/ld: nc4hdf.c:(.text+0x1746): undefined reference to `H5Pclose' /usr/bin/ld: nc4hdf.c:(.text+0x175d): undefined reference to `H5Sclose' /usr/bin/ld: nc4hdf.c:(.text+0x1862): undefined reference to `H5Pset_fill_value' /usr/bin/ld: nc4hdf.c:(.text+0x1877): undefined reference to `H5Tclose' /usr/bin/ld: nc4hdf.c:(.text+0x18a4): undefined reference to `H5Pset_shuffle' /usr/bin/ld: nc4hdf.c:(.text+0x18c3): undefined reference to `H5Pset_deflate' /usr/bin/ld: nc4hdf.c:(.text+0x1b6f): undefined reference to `H5Pset_layout' /usr/bin/ld: nc4hdf.c:(.text+0x1b90): undefined reference to `H5Screate_simple' /usr/bin/ld: nc4hdf.c:(.text+0x1ba9): undefined reference to `H5Pset_attr_creation_order' /usr/bin/ld: nc4hdf.c:(.text+0x1bfc): undefined reference to `H5Dcreate2' /usr/bin/ld: nc4hdf.c:(.text+0x1c4e): undefined reference to `H5DSset_scale' /usr/bin/ld: nc4hdf.c:(.text+0x1c94): undefined reference to `H5Aclose' /usr/bin/ld: nc4hdf.c:(.text+0x1cf4): undefined reference to `H5Pset_fletcher32' /usr/bin/ld: nc4hdf.c:(.text+0x1d0b): undefined reference to `H5Screate' /usr/bin/ld: nc4hdf.c:(.text+0x1d2d): undefined reference to `H5Pset_filter' /usr/bin/ld: nc4hdf.c:(.text+0x1d49): undefined reference to `H5Pset_fill_value' /usr/bin/ld: nc4hdf.c:(.text+0x1d7d): undefined reference to `H5Screate_simple' /usr/bin/ld: nc4hdf.c:(.text+0x1d90): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0x1da2): undefined reference to `H5T_NATIVE_INT_g' /usr/bin/ld: nc4hdf.c:(.text+0x1daf): undefined reference to `H5Acreate1' /usr/bin/ld: nc4hdf.c:(.text+0x1dd0): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0x1ddc): undefined reference to `H5T_NATIVE_INT_g' /usr/bin/ld: nc4hdf.c:(.text+0x1df2): undefined reference to `H5Awrite' /usr/bin/ld: nc4hdf.c:(.text+0x1e05): undefined reference to `H5Sclose' /usr/bin/ld: nc4hdf.c:(.text+0x1e1a): undefined reference to `H5Aclose' /usr/bin/ld: nc4hdf.c:(.text+0x1e42): undefined reference to `H5Tclose' /usr/bin/ld: nc4hdf.c:(.text+0x1e60): undefined reference to `H5Pset_szip' /usr/bin/ld: nc4hdf.c:(.text+0x1e8b): undefined reference to `H5Pset_chunk_cache' /usr/bin/ld: nc4hdf.c:(.text+0x1ee0): undefined reference to `H5Sclose' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-nc4hdf.o): in function `commit_type': nc4hdf.c:(.text+0x1ff4): undefined reference to `H5Tenum_create' /usr/bin/ld: nc4hdf.c:(.text+0x203e): undefined reference to `H5Tenum_insert' /usr/bin/ld: nc4hdf.c:(.text+0x2067): undefined reference to `H5Tcommit1' /usr/bin/ld: nc4hdf.c:(.text+0x207d): undefined reference to `H5Tget_native_type' /usr/bin/ld: nc4hdf.c:(.text+0x20be): undefined reference to `H5Tvlen_create' /usr/bin/ld: nc4hdf.c:(.text+0x20ea): undefined reference to `H5Tcreate' /usr/bin/ld: nc4hdf.c:(.text+0x2174): undefined reference to `H5Tinsert' /usr/bin/ld: nc4hdf.c:(.text+0x2184): undefined reference to `H5Tclose' /usr/bin/ld: nc4hdf.c:(.text+0x21da): undefined reference to `H5Tarray_create1' /usr/bin/ld: nc4hdf.c:(.text+0x21ec): undefined reference to `H5Tclose' /usr/bin/ld: nc4hdf.c:(.text+0x220a): undefined reference to `H5Tcreate' /usr/bin/ld: nc4hdf.c:(.text+0x2241): undefined reference to `H5Tclose' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-nc4hdf.o): in function `nc4_create_dim_wo_var': nc4hdf.c:(.text+0x2363): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0x236a): undefined reference to `H5P_CLS_DATASET_CREATE_ID_g' /usr/bin/ld: nc4hdf.c:(.text+0x236f): undefined reference to `H5Pcreate' /usr/bin/ld: nc4hdf.c:(.text+0x2385): undefined reference to `H5Pset_obj_track_times' /usr/bin/ld: nc4hdf.c:(.text+0x23bd): undefined reference to `H5Pset_chunk' /usr/bin/ld: nc4hdf.c:(.text+0x23d9): undefined reference to `H5Screate_simple' /usr/bin/ld: nc4hdf.c:(.text+0x23f2): undefined reference to `H5Pset_attr_creation_order' /usr/bin/ld: nc4hdf.c:(.text+0x23fb): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0x240f): undefined reference to `H5T_IEEE_F32BE_g' /usr/bin/ld: nc4hdf.c:(.text+0x241d): undefined reference to `H5Dcreate2' /usr/bin/ld: nc4hdf.c:(.text+0x244f): undefined reference to `H5DSset_scale' /usr/bin/ld: nc4hdf.c:(.text+0x247e): undefined reference to `H5Sclose' /usr/bin/ld: nc4hdf.c:(.text+0x249e): undefined reference to `H5Pclose' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-nc4hdf.o): in function `nc4_rec_write_metadata': nc4hdf.c:(.text+0x274a): undefined reference to `H5DSdetach_scale' /usr/bin/ld: nc4hdf.c:(.text+0x29d6): undefined reference to `H5Dset_extent' /usr/bin/ld: nc4hdf.c:(.text+0x2a4e): undefined reference to `H5Dclose' /usr/bin/ld: nc4hdf.c:(.text+0x2a6f): undefined reference to `H5Gunlink' /usr/bin/ld: nc4hdf.c:(.text+0x2bcd): undefined reference to `H5Aexists' /usr/bin/ld: nc4hdf.c:(.text+0x2be0): undefined reference to `H5Adelete' /usr/bin/ld: nc4hdf.c:(.text+0x2bf1): undefined reference to `H5Aexists' /usr/bin/ld: nc4hdf.c:(.text+0x2c04): undefined reference to `H5Adelete' /usr/bin/ld: nc4hdf.c:(.text+0x2c15): undefined reference to `H5Aexists' /usr/bin/ld: nc4hdf.c:(.text+0x2c2c): undefined reference to `H5Adelete' /usr/bin/ld: nc4hdf.c:(.text+0x2da2): undefined reference to `H5DSattach_scale' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-nc4hdf.o): in function `nc4_rec_write_groups_types': nc4hdf.c:(.text+0x3112): undefined reference to `H5Aexists' /usr/bin/ld: nc4hdf.c:(.text+0x312a): undefined reference to `H5Screate' /usr/bin/ld: nc4hdf.c:(.text+0x3137): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0x3147): undefined reference to `H5T_NATIVE_INT_g' /usr/bin/ld: nc4hdf.c:(.text+0x3151): undefined reference to `H5Acreate1' /usr/bin/ld: nc4hdf.c:(.text+0x3162): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0x3169): undefined reference to `H5T_NATIVE_INT_g' /usr/bin/ld: nc4hdf.c:(.text+0x3176): undefined reference to `H5Awrite' /usr/bin/ld: nc4hdf.c:(.text+0x3198): undefined reference to `H5Aclose' /usr/bin/ld: nc4hdf.c:(.text+0x31d2): undefined reference to `H5open' /usr/bin/ld: nc4hdf.c:(.text+0x31d9): undefined reference to `H5P_CLS_GROUP_CREATE_ID_g' /usr/bin/ld: nc4hdf.c:(.text+0x31de): undefined reference to `H5Pcreate' /usr/bin/ld: nc4hdf.c:(.text+0x31f0): undefined reference to `H5Pset_obj_track_times' /usr/bin/ld: nc4hdf.c:(.text+0x3201): undefined reference to `H5Pset_link_creation_order' /usr/bin/ld: nc4hdf.c:(.text+0x3212): undefined reference to `H5Pset_attr_creation_order' /usr/bin/ld: nc4hdf.c:(.text+0x322b): undefined reference to `H5Gcreate2' /usr/bin/ld: nc4hdf.c:(.text+0x323b): undefined reference to `H5Pclose' /usr/bin/ld: nc4hdf.c:(.text+0x3254): undefined reference to `H5Pclose' /usr/bin/ld: nc4hdf.c:(.text+0x3275): undefined reference to `H5Gclose' /usr/bin/ld: nc4hdf.c:(.text+0x3288): undefined reference to `H5Sclose' /usr/bin/ld: nc4hdf.c:(.text+0x329b): undefined reference to `H5Sclose' /usr/bin/ld: nc4hdf.c:(.text+0x32b0): undefined reference to `H5Aclose' /usr/bin/ld: nc4hdf.c:(.text+0x32db): undefined reference to `H5Aclose' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-nc4hdf.o): in function `nc4_rec_match_dimscales': nc4hdf.c:(.text+0x35ee): undefined reference to `H5Dget_space' /usr/bin/ld: nc4hdf.c:(.text+0x360f): undefined reference to `H5Sget_simple_extent_type' /usr/bin/ld: nc4hdf.c:(.text+0x3622): undefined reference to `H5Sclose' /usr/bin/ld: nc4hdf.c:(.text+0x37a1): undefined reference to `H5Sget_simple_extent_dims' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-nc4hdf.o): in function `reportobject': nc4hdf.c:(.text+0x397a): undefined reference to `H5Iget_name' /usr/bin/ld: nc4hdf.c:(.text+0x3a0c): undefined reference to `H5Aget_name' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-nc4hdf.o): in function `reportopenobjectsT.constprop.8': nc4hdf.c:(.text+0x3a7b): undefined reference to `H5Fget_obj_count' /usr/bin/ld: nc4hdf.c:(.text+0x3ab4): undefined reference to `H5Fget_obj_ids' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-nc4hdf.o): in function `NC4_hdf5get_libversion': nc4hdf.c:(.text+0x3c75): undefined reference to `H5get_libversion' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-nc4hdf.o): in function `NC4_hdf5get_superblock': nc4hdf.c:(.text+0x3cad): undefined reference to `H5Fget_create_plist' /usr/bin/ld: nc4hdf.c:(.text+0x3cc9): undefined reference to `H5Pget_version' /usr/bin/ld: nc4hdf.c:(.text+0x3ce4): undefined reference to `H5Pclose' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-nc4hdf.o): in function `NC4_isnetcdf4': nc4hdf.c:(.text+0x3d4a): undefined reference to `H5Aopen_name' /usr/bin/ld: nc4hdf.c:(.text+0x3d55): undefined reference to `H5Aclose' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-nc4hdf.o): in function `nc4_filter_action': nc4hdf.c:(.text+0x3e15): undefined reference to `H5Zunregister' /usr/bin/ld: nc4hdf.c:(.text+0x3eba): undefined reference to `H5Zregister' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-nc4info.o): in function `NC4_read_provenance': nc4info.c:(.text+0x28b): undefined reference to `H5Aexists' /usr/bin/ld: nc4info.c:(.text+0x2a0): undefined reference to `H5Aopen_name' /usr/bin/ld: nc4info.c:(.text+0x2b4): undefined reference to `H5Aget_space' /usr/bin/ld: nc4info.c:(.text+0x2c0): undefined reference to `H5Aget_type' /usr/bin/ld: nc4info.c:(.text+0x2cb): undefined reference to `H5Tget_class' /usr/bin/ld: nc4info.c:(.text+0x2f1): undefined reference to `H5Aclose' /usr/bin/ld: nc4info.c:(.text+0x307): undefined reference to `H5Sclose' /usr/bin/ld: nc4info.c:(.text+0x31a): undefined reference to `H5Tclose' /usr/bin/ld: nc4info.c:(.text+0x32f): undefined reference to `H5Tclose' /usr/bin/ld: nc4info.c:(.text+0x374): undefined reference to `H5Tget_size' /usr/bin/ld: nc4info.c:(.text+0x39d): undefined reference to `H5Tget_native_type' /usr/bin/ld: nc4info.c:(.text+0x3b3): undefined reference to `H5Aread' /usr/bin/ld: nc4info.c:(.text+0x3dd): undefined reference to `H5Tclose' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-nc4info.o): in function `NC4_write_provenance': nc4info.c:(.text+0x48f): undefined reference to `H5Aexists' /usr/bin/ld: nc4info.c:(.text+0x4a7): undefined reference to `H5open' /usr/bin/ld: nc4info.c:(.text+0x4ae): undefined reference to `H5T_C_S1_g' /usr/bin/ld: nc4info.c:(.text+0x4b3): undefined reference to `H5Tcopy' /usr/bin/ld: nc4info.c:(.text+0x4c9): undefined reference to `H5Tset_strpad' /usr/bin/ld: nc4info.c:(.text+0x4db): undefined reference to `H5Tset_cset' /usr/bin/ld: nc4info.c:(.text+0x4f7): undefined reference to `H5Tset_size' /usr/bin/ld: nc4info.c:(.text+0x506): undefined reference to `H5Screate' /usr/bin/ld: nc4info.c:(.text+0x528): undefined reference to `H5Acreate1' /usr/bin/ld: nc4info.c:(.text+0x543): undefined reference to `H5Awrite' /usr/bin/ld: nc4info.c:(.text+0x55e): undefined reference to `H5Aclose' /usr/bin/ld: nc4info.c:(.text+0x573): undefined reference to `H5Sclose' /usr/bin/ld: nc4info.c:(.text+0x588): undefined reference to `H5Tclose' /usr/bin/ld: nc4info.c:(.text+0x5ce): undefined reference to `H5Tclose' /usr/bin/ld: nc4info.c:(.text+0x5fe): undefined reference to `H5Sclose' /usr/bin/ld: nc4info.c:(.text+0x613): undefined reference to `H5Tclose' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-nc4memcb.o): in function `NC4_image_init': nc4memcb.c:(.text+0x3d6): undefined reference to `H5open' /usr/bin/ld: nc4memcb.c:(.text+0x3dd): undefined reference to `H5P_CLS_FILE_ACCESS_ID_g' /usr/bin/ld: nc4memcb.c:(.text+0x3e2): undefined reference to `H5Pcreate' /usr/bin/ld: nc4memcb.c:(.text+0x429): undefined reference to `H5Pset_fapl_core' /usr/bin/ld: nc4memcb.c:(.text+0x4ba): undefined reference to `H5Pset_file_image_callbacks' /usr/bin/ld: nc4memcb.c:(.text+0x4d1): undefined reference to `H5Pset_file_image' /usr/bin/ld: nc4memcb.c:(.text+0x522): undefined reference to `H5check_version' /usr/bin/ld: nc4memcb.c:(.text+0x527): undefined reference to `H5open' /usr/bin/ld: nc4memcb.c:(.text+0x537): undefined reference to `H5Fopen' /usr/bin/ld: nc4memcb.c:(.text+0x556): undefined reference to `H5Eauto_is_v2' /usr/bin/ld: nc4memcb.c:(.text+0x56d): undefined reference to `H5Eget_auto1' /usr/bin/ld: nc4memcb.c:(.text+0x576): undefined reference to `H5Eset_auto1' /usr/bin/ld: nc4memcb.c:(.text+0x583): undefined reference to `H5Pclose' /usr/bin/ld: nc4memcb.c:(.text+0x59f): undefined reference to `H5Eset_auto2' /usr/bin/ld: nc4memcb.c:(.text+0x5cd): undefined reference to `H5Eget_auto2' /usr/bin/ld: nc4memcb.c:(.text+0x5d8): undefined reference to `H5Eset_auto2' /usr/bin/ld: nc4memcb.c:(.text+0x604): undefined reference to `H5Eset_auto1' /usr/bin/ld: nc4memcb.c:(.text+0x611): undefined reference to `H5check_version' /usr/bin/ld: nc4memcb.c:(.text+0x616): undefined reference to `H5open' /usr/bin/ld: nc4memcb.c:(.text+0x62a): undefined reference to `H5Fcreate' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-hdf5attr.o): in function `NC4_HDF5_rename_att': hdf5attr.c:(.text+0x3ed): undefined reference to `H5Adelete' /usr/bin/ld: hdf5attr.c:(.text+0x55d): undefined reference to `H5Adelete' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-hdf5attr.o): in function `NC4_HDF5_del_att': hdf5attr.c:(.text+0x6bf): undefined reference to `H5Adelete' /usr/bin/ld: /home/mohapatra/ROPP_dir/gfortran/lib/libnetcdf.a(libnchdf5_la-hdf5create.o): in function `NC4_create': hdf5create.c:(.text+0x12d): undefined reference to `H5check_version' /usr/bin/ld: hdf5create.c:(.text+0x132): undefined reference to `H5open' /usr/bin/ld: hdf5create.c:(.text+0x171): undefined reference to `H5Pclose' /usr/bin/ld: hdf5create.c:(.text+0x1d8): undefined reference to `H5check_version' /usr/bin/ld: hdf5create.c:(.text+0x1dd): undefined reference to `H5open' /usr/bin/ld: hdf5create.c:(.text+0x1e8): undefined reference to `H5open' /usr/bin/ld: hdf5create.c:(.text+0x1ef): undefined reference to `H5P_CLS_FILE_ACCESS_ID_g' /usr/bin/ld: hdf5create.c:(.text+0x1f4): undefined reference to `H5Pcreate' /usr/bin/ld: hdf5create.c:(.text+0x20d): undefined reference to `H5Pset_fclose_degree' /usr/bin/ld: hdf5create.c:(.text+0x239): undefined reference to `H5Pset_cache' /usr/bin/ld: hdf5create.c:(.text+0x250): undefined reference to `H5Pset_libver_bounds' /usr/bin/ld: hdf5create.c:(.text+0x25d): undefined reference to `H5open' /usr/bin/ld: hdf5create.c:(.text+0x264): undefined reference to `H5P_CLS_FILE_CREATE_ID_g' /usr/bin/ld: hdf5create.c:(.text+0x269): undefined reference to `H5Pcreate' /usr/bin/ld: hdf5create.c:(.text+0x281): undefined reference to `H5Pset_obj_track_times' /usr/bin/ld: hdf5create.c:(.text+0x29b): undefined reference to `H5Pset_link_creation_order' /usr/bin/ld: hdf5create.c:(.text+0x2b5): undefined reference to `H5Pset_attr_creation_order' /usr/bin/ld: hdf5create.c:(.text+0x342): undefined reference to `H5Pset_fapl_core' /usr/bin/ld: hdf5create.c:(.text+0x366): undefined reference to `H5Fcreate' /usr/bin/ld: hdf5create.c:(.text+0x38d): undefined reference to `H5Gopen2' /usr/bin/ld: hdf5create.c:(.text+0x3b0): undefined reference to `H5Pclose' /usr/bin/ld: hdf5create.c:(.text+0x3c5): undefined reference to `H5Pclose' /usr/bin/ld: hdf5create.c:(.text+0x416): undefined reference to `H5check_version' /usr/bin/ld: hdf5create.c:(.text+0x41b): undefined reference to `H5open' collect2: error: ld returned 1 exit status make[2]: *** [tools/CMakeFiles/grib_to_netcdf.dir/build.make:94: bin/grib_to_netcdf] Error 1 make[1]: *** [CMakeFiles/Makefile2:1334: tools/CMakeFiles/grib_to_netcdf.dir/all] Error 2 make: *** [Makefile:163: all] Error 2 Directory: /home/mohapatra/ROPP_dir/gfortran/include -rw-r--r--. 1 mohapatra mohapatra 5821 Apr 20 14:33 netcdf_nc_data.mod -rw-r--r--. 1 mohapatra mohapatra 11486 Apr 20 14:33 netcdf_nf_interfaces.mod -rw-r--r--. 1 mohapatra mohapatra 5476 Apr 20 14:33 netcdf4_nf_interfaces.mod -rw-r--r--. 1 mohapatra mohapatra 26763 Apr 20 14:33 netcdf4_nc_interfaces.mod -rw-r--r--. 1 mohapatra mohapatra 27100 Apr 20 14:33 netcdf4_f03.mod -rw-r--r--. 1 mohapatra mohapatra 22383 Apr 20 14:33 netcdf.mod -rw-r--r--. 1 mohapatra mohapatra 55383 Apr 20 14:33 netcdf.inc -rw-rw-r--. 1 mohapatra mohapatra 791 Apr 20 16:40 bufrutils.mod -rw-rw-r--. 1 mohapatra mohapatra 1121 Apr 20 16:40 gtshdrs.mod -rw-rw-r--. 1 mohapatra mohapatra 733 Apr 20 16:40 sec1tables.mod Directory: /home/mohapatra/ROPP_dir/gfortran/lib -rw-r--r--. 1 mohapatra mohapatra 4112 Apr 20 14:24 libhdf5.settings -rwxr-xr-x. 1 mohapatra mohapatra 1042 Apr 20 14:24 libhdf5_hl.la -rw-r--r--. 1 mohapatra mohapatra 213746 Apr 20 14:24 libhdf5_hl.a -rwxr-xr-x. 1 mohapatra mohapatra 1090 Apr 20 14:32 libnetcdf.la -rw-r--r--. 1 mohapatra mohapatra 1359300 Apr 20 14:32 libnetcdf.a -rw-r--r--. 1 mohapatra mohapatra 1015 Apr 20 14:32 libnetcdf.settings -rwxr-xr-x. 1 mohapatra mohapatra 1159 Apr 20 14:33 libnetcdff.la -rw-r--r--. 1 mohapatra mohapatra 572442 Apr 20 14:33 libnetcdff.a drwxrwxr-x. 2 mohapatra mohapatra 4096 Apr 20 14:33 pkgconfig -rw-rw-r--. 1 mohapatra mohapatra 912486 Apr 20 16:42 libbufr.a Directory: /home/mohapatra/ROPP_dir/gfortran/lib64 total 308 -rw-rw-r--. 1 mohapatra mohapatra 312346 Apr 20 16:40 libmetdbbufr.a Directory: /home/mohapatra/ROPP_dir/gfortran/bin -rwxr-xr-x. 1 mohapatra mohapatra 3085136 Apr 20 14:24 h52gif -rwxr-xr-x. 1 mohapatra mohapatra 3028080 Apr 20 14:24 h5watch -rwxr-xr-x. 1 mohapatra mohapatra 4240184 Apr 20 14:32 ncgen3 -rwxr-xr-x. 1 mohapatra mohapatra 4389272 Apr 20 14:32 ncgen -rwxr-xr-x. 1 mohapatra mohapatra 4265552 Apr 20 14:32 ncdump -rwxr-xr-x. 1 mohapatra mohapatra 4228256 Apr 20 14:32 nccopy -rwxr-xr-x. 1 mohapatra mohapatra 8038 Apr 20 14:32 nc-config -rwxr-xr-x. 1 mohapatra mohapatra 3079 Apr 20 14:33 nf-config -rwxrwxr-x. 1 mohapatra mohapatra 132416 Apr 20 16:40 decbufr -rwxrwxr-x. 1 mohapatra mohapatra 80912 Apr 20 16:40 testtables Directory: /home/mohapatra/ROPP_dir/gfortran/man/man1 total 0 Directory: /home/mohapatra/ROPP_dir/gfortran/share/man/man1 -rw-r--r--. 1 mohapatra mohapatra 2170 Apr 20 11:39 ropp_1dvar_add_bgr_error.1 -rw-r--r--. 1 mohapatra mohapatra 3077 Apr 20 11:39 ropp_1dvar_add_refrac_error.1 -rw-r--r--. 1 mohapatra mohapatra 2264 Apr 20 11:39 ropp_1dvar_add_bangle_error.1 -rw-r--r--. 1 mohapatra mohapatra 3905 Apr 20 11:39 ropp_1dvar_refrac.1 -rw-r--r--. 1 mohapatra mohapatra 3641 Apr 20 11:39 ropp_1dvar_dbangle.1 -rw-r--r--. 1 mohapatra mohapatra 4182 Apr 20 11:39 ropp_1dvar_bangle.1 -rw-r--r--. 1 mohapatra mohapatra 15040 Apr 20 14:32 ncgen3.1 -rw-r--r--. 1 mohapatra mohapatra 42577 Apr 20 14:32 ncgen.1 -rw-r--r--. 1 mohapatra mohapatra 13133 Apr 20 14:32 ncdump.1 -rw-r--r--. 1 mohapatra mohapatra 20918 Apr 20 14:32 nccopy.1 ------------------------------------------------------------------ Done. Check messages to confirm successful build & installation ------------------------------------------------------------------ --------------------------------------------------------------------- >> Finished at: 20-Apr-2022 11:13 UT Elapsed: 00:00:15 ---------------------------------------------------------------------